RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 OR3A1P47881 315 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 ELLP55199 621 aaPredicted RBP13.19□□□□□ -0.3
SMG6-207ENST00000570756 CLDN15P56746 228 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 GNB2P62879 340 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 ZNF573Q86YE8 665 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 TMEM208Q9BTX3 173 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 WDR61Q9GZS3 305 aaKnown RBP13.19□□□□□ -0.3
SMG6-207ENST00000570756 MYO15AQ9UKN7 3530 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 KIAA1324LA8MWY0 1029 aaPredicted RBP13.19□□□□□ -0.3
SMG6-207ENST00000570756 ZFAND5O76080 213 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 VENTXO95231 258 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 NAPSAO96009 420 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 BTNL3Q6UXE8 466 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 ZNF611Q8N823 705 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 IMMP2LQ96T52 175 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 FGF21Q9NSA1 209 aa13.19□□□□□ -0.3
SMG6-207ENST00000570756 A0A0G2JRQ6 117 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 ZNF816-ZNF321PA0A0X1KG74 233 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 SOX15O60248 233 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 LINC00614P0C842 121 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 PRSS12P56730 875 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 OR1D5P58170 312 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 ZNF774Q6NX45 483 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 FADS6Q8N9I5 356 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 PIGCQ92535 297 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 THOC3Q96J01 351 aaKnown RBP13.18□□□□□ -0.3
SMG6-207ENST00000570756 MANBALQ9NQG1 85 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 TIMM9Q9Y5J7 89 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 hCG_38984A0A1B0GV85 526 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 DUX1O43812 170 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 RPL29P47914 159 aaKnown RBP13.18□□□□□ -0.3
SMG6-207ENST00000570756 ZNF92Q03936 586 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 RTP5Q14D33 572 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 CLEC12BQ2HXU8 276 aa13.18□□□□□ -0.3
SMG6-207ENST00000570756 CHD3Q12873 2000 aaKnown RBP13.18□□□□□ -0.3
SMG6-207ENST00000570756 CD300LBA8K4G0 201 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 GYPAP02724 150 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 KIAA2026Q5HYC2 2103 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 TAF15Q92804 592 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMG6-207ENST00000570756 LSM10Q969L4 123 aaKnown RBP13.17□□□□□ -0.3
SMG6-207ENST00000570756 ZNF501Q96CX3 271 aaPredicted RBP13.17□□□□□ -0.3
SMG6-207ENST00000570756 MS4A10Q96PG2 267 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 CACNG5Q9UF02 275 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 ATP23Q9Y6H3 246 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 IGHV1OR21-1A0A087WYE8 117 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 IAPPP10997 89 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 ARL16Q0P5N6 197 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 DAZAP2Q15038 168 aaPredicted RBP13.17□□□□□ -0.3
SMG6-207ENST00000570756 ZNF705AQ6ZN79 300 aaPredicted RBP13.17□□□□□ -0.3
SMG6-207ENST00000570756 CALHM1Q8IU99 346 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 Q8NFD4 153 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 OR4F5Q8NH21 305 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 SPACA9Q96E40 222 aaPredicted RBP13.17□□□□□ -0.3
SMG6-207ENST00000570756 OR4F4Q96R69 305 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 IL17BQ9UHF5 180 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 LAMA1P25391 3075 aa13.17□□□□□ -0.3
SMG6-207ENST00000570756 MED12Q93074 2177 aa13.16□□□□□ -0.3
SMG6-207ENST00000570756 IGLV3-12A0A075B6K2 115 aa13.16□□□□□ -0.3
SMG6-207ENST00000570756 IGHV3-15A0A0B4J1V0 119 aa13.16□□□□□ -0.3
SMG6-207ENST00000570756 LRP5LA4QPB2 252 aa13.16□□□□□ -0.3
SMG6-207ENST00000570756 ZNF705FA8MVS1 300 aaPredicted RBP13.16□□□□□ -0.3
SMG6-207ENST00000570756 LMO7DNF2Z398 122 aa13.16□□□□□ -0.3
SMG6-207ENST00000570756 ZNF705DP0CH99 300 aaPredicted RBP13.16□□□□□ -0.3
SMG6-207ENST00000570756 ZNF705BP0CI00 300 aaPredicted RBP13.16□□□□□ -0.3
SMG6-207ENST00000570756 TESK1Q15569 626 aa13.16□□□□□ -0.3
SMG6-207ENST00000570756 RPP25LQ8N5L8 163 aaKnown RBP13.16□□□□□ -0.3
SMG6-207ENST00000570756 OR51H1Q8NH63 302 aa13.16□□□□□ -0.3
SMG6-207ENST00000570756 NEK7Q8TDX7 302 aa13.16□□□□□ -0.3
SMG6-207ENST00000570756 REPIN1Q9BWE0 567 aaKnown RBP13.16□□□□□ -0.3
SMG6-207ENST00000570756 PHF7Q9BWX1 381 aaPredicted RBP13.16□□□□□ -0.3
SMG6-207ENST00000570756 CTXND1A0A1B0GTU2 59 aa13.15□□□□□ -0.3
SMG6-207ENST00000570756 OR6C6A6NF89 314 aa13.15□□□□□ -0.3
SMG6-207ENST00000570756 PSG2P11465 335 aa13.15□□□□□ -0.3
SMG6-207ENST00000570756 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.15□□□□□ -0.3
SMG6-207ENST00000570756 KMT5CQ86Y97 462 aa13.15□□□□□ -0.3
SMG6-207ENST00000570756 OR4C12Q96R67 309 aa13.15□□□□□ -0.3
SMG6-207ENST00000570756 UBE2L5PA0A1B0GUS4 154 aa13.15□□□□□ -0.3
SMG6-207ENST00000570756 TP53I11O14683 189 aa13.15□□□□□ -0.3
SMG6-207ENST00000570756 HPRT1P00492 218 aa13.15□□□□□ -0.3
SMG6-207ENST00000570756 HAPLN4Q86UW8 402 aa13.15□□□□□ -0.3
SMG6-207ENST00000570756 ZCCHC14Q8WYQ9 949 aaKnown RBP13.15□□□□□ -0.3
SMG6-207ENST00000570756 ZNF837Q96EG3 531 aaPredicted RBP13.15□□□□□ -0.3
SMG6-207ENST00000570756 RIMS4Q9H426 269 aaPredicted RBP13.15□□□□□ -0.3
SMG6-207ENST00000570756 TRAPPC1Q9Y5R8 145 aa13.15□□□□□ -0.3
SMG6-207ENST00000570756 PDGFBP01127 241 aaPredicted RBP13.14□□□□□ -0.31
SMG6-207ENST00000570756 WNT2P09544 360 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 CD38P28907 300 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 PPP1CBP62140 327 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 BATF2Q8N1L9 274 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 NEIL1Q96FI4 390 aaPredicted RBP13.14□□□□□ -0.31
SMG6-207ENST00000570756 UCN2Q96RP3 112 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 TBX15Q96SF7 602 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 OR2W1Q9Y3N9 320 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 IGKV1-6A0A0C4DH72 117 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 CD99P14209 185 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 IL3RAP26951 378 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 FGF12P61328 243 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 RANP62826 216 aaKnown RBP13.14□□□□□ -0.31
SMG6-207ENST00000570756 CFHR1Q03591 330 aa13.14□□□□□ -0.31
SMG6-207ENST00000570756 SLC38A11Q08AI6 406 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms