RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 PIN1P1O15428 100 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 BUB3O43684 328 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 XPNPEP2O43895 674 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 FKBP6O75344 327 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 MMP23AO75900 390 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 IGLV1-47P01700 117 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 ARG1P05089 322 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 PIPP12273 146 aaPredicted RBP4.39□□□□□ -1.71
GDE1-204ENST00000569773 HOXB6P17509 224 aaKnown RBP4.39□□□□□ -1.71
GDE1-204ENST00000569773 CAPZA1P52907 286 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 ESRRGP62508 458 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 CBX1P83916 185 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 EMX1Q04741 257 aaPredicted RBP4.39□□□□□ -1.71
GDE1-204ENST00000569773 MEF2CQ06413 473 aaPredicted RBP4.39□□□□□ -1.71
GDE1-204ENST00000569773 SSX2Q16385 188 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 NSUN5P1Q3KNT7 163 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 BCL2L15Q5TBC7 163 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 SLX4IPQ5VYV7 408 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 NXNL2Q5VZ03 156 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 C12orf73Q69YU5 71 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 KDM4DQ6B0I6 523 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 BAIAP2L2Q6UXY1 529 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 ASRGL1Q7L266 308 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 SLC35F2Q8IXU6 374 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 PRSS35Q8N3Z0 413 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 GBGT1Q8N5D6 347 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 OR4P4Q8NGL7 312 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 RPS4Y2Q8TD47 263 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 DNAJC9Q8WXX5 260 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 THTPAQ9BU02 230 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 CHST5Q9GZS9 411 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 PPIL3Q9H2H8 161 aaKnown RBP4.39□□□□□ -1.71
GDE1-204ENST00000569773 ZNF556Q9HAH1 456 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 CHMP1AQ9HD42 196 aaPredicted RBP4.39□□□□□ -1.71
GDE1-204ENST00000569773 NECAP2Q9NVZ3 263 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 CLN6Q9NWW5 311 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 IKZF2Q9UKS7 526 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 HHLA2Q9UM44 414 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 POMPQ9Y244 141 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 POLDIP2Q9Y2S7 368 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 TMEM14AQ9Y6G1 99 aa4.39□□□□□ -1.71
GDE1-204ENST00000569773 ABCA13Q86UQ4 5058 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 SORL1Q92673 2214 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 IGHV2-26A0A0B4J1V2 119 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 E9PQ18 207 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 LY6LH3BQJ8 138 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 K7EIL1 84 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 ENTPD6O75354 484 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 FAM107AO95990 144 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 ERP29P30040 261 aaKnown RBP4.38□□□□□ -1.71
GDE1-204ENST00000569773 KIR3DL2P43630 455 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 OR3A1P47881 315 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 NPBWR2P48146 333 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 ACTA2P62736 377 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 ACTG2P63267 376 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 ACTC1P68032 377 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 ACTA1P68133 377 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 RPL36AP83881 106 aaKnown RBP4.38□□□□□ -1.71
GDE1-204ENST00000569773 FLOT2Q14254 428 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 ZNF146Q15072 292 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 KCTD21Q4G0X4 260 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 UTF1Q5T230 341 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 MINOS1Q5TGZ0 78 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 C10orf99Q6UWK7 81 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 COMMD2Q86X83 199 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 TPRX1Q8N7U7 411 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 TCEANCQ8N8B7 351 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 ASCC1Q8N9N2 400 aaKnown RBP4.38□□□□□ -1.71
GDE1-204ENST00000569773 OR4F17Q8NGA8 305 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 OR4S1Q8NGB4 309 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 OR13D1Q8NGV5 346 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 TRMT10AQ8TBZ6 339 aaKnown RBP4.38□□□□□ -1.71
GDE1-204ENST00000569773 MRAPQ8TCY5 172 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 THRSPQ92748 146 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 CEP19Q96LK0 163 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 ZNF714Q96N38 554 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 OR4F4Q96R69 305 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 NKX3-1Q99801 234 aaPredicted RBP4.38□□□□□ -1.71
GDE1-204ENST00000569773 GABARAPL1Q9H0R8 117 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 TMEM133Q9H2Q1 129 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.38□□□□□ -1.71
GDE1-204ENST00000569773 PITPNC1Q9UKF7 332 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 LINC00312Q9Y6C7 94 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 MINOS1-NBL1R4GNA1 71 aa4.38□□□□□ -1.71
GDE1-204ENST00000569773 IGKV1-12A0A0C4DH73 117 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 TRBV2A0A0J9YWF9 115 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 FAM230AA0A1W2PPH8 454 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 A0A1W2PQL4 384 aaPredicted RBP4.37□□□□□ -1.71
GDE1-204ENST00000569773 KRTAP29-1A8MX34 341 aaPredicted RBP4.37□□□□□ -1.71
GDE1-204ENST00000569773 ZNF670-ZNF695F2Z2N8 137 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 J3QRE1 110 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 GNGT2O14610 69 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 SULT1C4O75897 302 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 HAND1O96004 215 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 IGKV1D-12P01611 117 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 S100A6P06703 90 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 CGB3P0DN86 165 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 CGB7P0DN87 165 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 IGLL1P15814 213 aa4.37□□□□□ -1.71
GDE1-204ENST00000569773 AZGP1P25311 298 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms