RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 SMIM8Q96KF7 97 aa4.53□□□□□ -1.68
SF3B3-213ENST00000569687 LURAP1Q96LR2 239 aa4.53□□□□□ -1.68
SF3B3-213ENST00000569687 FAM212BQ9NTI7 297 aaPredicted RBP4.53□□□□□ -1.68
SF3B3-213ENST00000569687 ELOVL5Q9NYP7 299 aa4.53□□□□□ -1.68
SF3B3-213ENST00000569687 ERRFI1Q9UJM3 462 aaPredicted RBP4.53□□□□□ -1.68
SF3B3-213ENST00000569687 FBXL7Q9UJT9 491 aa4.53□□□□□ -1.68
SF3B3-213ENST00000569687 NUP50Q9UKX7 468 aa4.53□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF835Q9Y2P0 537 aa4.53□□□□□ -1.68
SF3B3-213ENST00000569687 POMT1Q9Y6A1 747 aa4.53□□□□□ -1.68
SF3B3-213ENST00000569687 SESN1Q9Y6P5 492 aa4.53□□□□□ -1.68
SF3B3-213ENST00000569687 DMXL2Q8TDJ6 3036 aa4.53□□□□□ -1.68
SF3B3-213ENST00000569687 SHANK1Q9Y566 2161 aa4.53□□□□□ -1.68
SF3B3-213ENST00000569687 CACNA1GO43497 2377 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 IGLV3-9A0A075B6K5 115 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 OOEPA6NGQ2 149 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 KIAA1324LA8MWY0 1029 aaPredicted RBP4.52□□□□□ -1.69
SF3B3-213ENST00000569687 F8W735 103 aaPredicted RBP4.52□□□□□ -1.69
SF3B3-213ENST00000569687 ZNF561-AS1K7EIQ3 104 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 SIRPB1O00241 398 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 TIMM8AO60220 97 aaPredicted RBP4.52□□□□□ -1.69
SF3B3-213ENST00000569687 PSPNO60542 156 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 CRYZL1O95825 349 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 LHBP01229 141 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 SEC11BP0C7V7 166 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 HOXB4P17483 251 aaPredicted RBP4.52□□□□□ -1.69
SF3B3-213ENST00000569687 GZMHP20718 246 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 PRDX2P32119 198 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 CEACAM6P40199 344 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 GATA4P43694 442 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 NKX2-1P43699 371 aaPredicted RBP4.52□□□□□ -1.69
SF3B3-213ENST00000569687 SULT1A2P50226 295 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 TDGF1P3P51864 188 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 S100A10P60903 97 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 BLOC1S1P78537 153 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 GNMTQ14749 295 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 IGFBP7Q16270 282 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 TBR1Q16650 682 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 MST1LQ2TV78 715 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 RPL7L1Q6DKI1 246 aaKnown RBP4.52□□□□□ -1.69
SF3B3-213ENST00000569687 TRAT1Q6PIZ9 186 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 FAM180AQ6UWF9 173 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 IL34Q6ZMJ4 242 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 DOLPP1Q86YN1 238 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 TCTEX1D1Q8N7M0 179 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 SLC35G3Q8N808 338 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 OR52M1Q8NGK5 317 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 LYPD6BQ8NI32 183 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 TMEM171Q8WVE6 324 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 S100PBPQ96BU1 408 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 GINS3Q9BRX5 216 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 CDIP1Q9H305 208 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 PLEKHF2Q9H8W4 249 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 TAF9BQ9HBM6 251 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 KCNIP1Q9NZI2 227 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 JKAMPQ9P055 326 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 LUZP4Q9P127 313 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 LPAR3Q9UBY5 353 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 TRAPPC2LQ9UL33 140 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 RAXQ9Y2V3 346 aa4.52□□□□□ -1.69
SF3B3-213ENST00000569687 PTPRZ1P23471 2315 aaPredicted RBP4.52□□□□□ -1.69
SF3B3-213ENST00000569687 PRRC2CQ9Y520 2896 aaKnown RBP4.51□□□□□ -1.69
SF3B3-213ENST00000569687 DOCK7Q96N67 2140 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 BORCS7-ASMTA0A0B4J1R7 106 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 RNF212BA8MTL3 300 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 SRRM5B3KS81 715 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 C12orf77C9JDV5 145 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 FAM229AH3BQW9 127 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 LGALS8O00214 317 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 HSPB6O14558 160 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 PRRG2O14669 202 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 HSD17B6O14756 317 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 ZNF737O75373 536 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 CRYAAP02489 173 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 SERPINE2P07093 398 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 PVALBP20472 110 aaPredicted RBP4.51□□□□□ -1.69
SF3B3-213ENST00000569687 OR3A1P47881 315 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 RAB5CP51148 216 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 RPS23P62266 143 aaKnown RBP4.51□□□□□ -1.69
SF3B3-213ENST00000569687 HTD2P86397 168 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 BAXQ07812 192 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 PJVKQ0ZLH3 352 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 EIF4EBP1Q13541 118 aaPredicted RBP4.51□□□□□ -1.69
SF3B3-213ENST00000569687 MSMPQ1L6U9 139 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 SMIM21Q3B7S5 101 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 ZNF585BQ52M93 769 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 FAM74A1Q5RGS3 127 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 C10orf91Q5T1B1 145 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 BTNL8Q6UX41 500 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 ZNF826PQ6ZT77 177 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 MRGPRGQ86SM5 289 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 OR2C3Q8N628 320 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 CD177Q8N6Q3 437 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 NUP37Q8NFH4 326 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 OR1S2Q8NGQ3 325 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 PPP1R35Q8TAP8 253 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 FAM222BQ8WU58 562 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 TMED6Q8WW62 240 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 ARL11Q969Q4 196 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 ERGIC1Q969X5 290 aa4.51□□□□□ -1.69
SF3B3-213ENST00000569687 GALMQ96C23 342 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms