RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 IDO2Q6ZQW0 420 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 CENPSQ8N2Z9 138 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 MINDY2Q8NBR6 621 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 RFESDQ8TAC1 157 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 CHPT1Q8WUD6 406 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 CORO2AQ92828 525 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 GALMQ96C23 342 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 RAB39BQ96DA2 213 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 GINS4Q9BRT9 223 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 GAL3ST2Q9H3Q3 398 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 OCEL1Q9H607 264 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 SLC2A8Q9NY64 477 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 OPN4Q9UHM6 478 aa9.14□□□□□ -0.95
SF3B3-205ENST00000564899 UBE2J1Q9Y385 318 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-205ENST00000564899 TRBV6-7A0A0A0MS04 114 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 IGHV4-61A0A0C4DH41 118 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 ZNF729A6NN14 1252 aaPredicted RBP9.13□□□□□ -0.95
SF3B3-205ENST00000564899 NPIPB11E5RHQ5 1161 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 HSPA12AO43301 675 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 DIRAS3O95661 229 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 CGB3P0DN86 165 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 CGB7P0DN87 165 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 SLC25A16P16260 332 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 FCGR2CP31995 323 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 LMO4P61968 165 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 LTC4SQ16873 150 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 C17orf58Q2M2W7 97 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 CD276Q5ZPR3 534 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 CCBE1Q6UXH8 406 aaPredicted RBP9.13□□□□□ -0.95
SF3B3-205ENST00000564899 OR6F1Q8NGZ6 308 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 OR10J5Q8NHC4 309 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 ZNF714Q96N38 554 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 ZNF2Q9BSG1 426 aaPredicted RBP9.13□□□□□ -0.95
SF3B3-205ENST00000564899 MMP28Q9H239 520 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 TAS2R3Q9NYW6 316 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 OR1A1Q9P1Q5 309 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 COPZ2Q9P299 210 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 ZNF69Q9UC07 566 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 SLC23A1Q9UHI7 598 aa9.13□□□□□ -0.95
SF3B3-205ENST00000564899 RPUSD1Q9UJJ7 312 aaKnown RBP9.13□□□□□ -0.95
SF3B3-205ENST00000564899 TENM1Q9UKZ4 2725 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 LOC105371242A0A075B767 164 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 A0A1W2PPH5 198 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 FAM172BPA6NC97 362 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 C22orf46C9J442 243 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 RNF223E7ERA6 249 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 F2RL2O00254 374 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 NDUFB6O95139 128 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 TCRBP04435 133 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 ZNF728P0DKX0 622 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 CCL3L1P16619 93 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 AADACP22760 399 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 NFYAP23511 347 aaPredicted RBP9.12□□□□□ -0.95
SF3B3-205ENST00000564899 OMGP23515 440 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 ZBTB25P24278 435 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 FPR2P25090 351 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 FXYD4P59646 89 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 RBMS2Q15434 407 aaKnown RBP9.12□□□□□ -0.95
SF3B3-205ENST00000564899 C11orf91Q3C1V1 193 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 PRAMEF5Q5TYX0 476 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 ZNF660Q6AZW8 331 aaPredicted RBP9.12□□□□□ -0.95
SF3B3-205ENST00000564899 PLET1Q6UQ28 207 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 LHFPL1Q86WI0 220 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 DUSP18Q8NEJ0 188 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 OR52L2PQ8NGH6 319 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 OR13C8Q8NGS7 320 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 TERB2Q8NHR7 220 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 C8orf46Q8TAG6 207 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 GIMAP1Q8WWP7 306 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 TMPRSS13Q9BYE2 586 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 OR2S2Q9NQN1 319 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 IDI2-AS1Q9NZ38 188 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 GNG12Q9UBI6 72 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 JPT1Q9UK76 154 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 NUBP2Q9Y5Y2 271 aa9.12□□□□□ -0.95
SF3B3-205ENST00000564899 IGHV3-43A0A0B4J1X8 118 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 PPIAL4CA0A0B4J2A2 164 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 OR5H14A6NHG9 310 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 A8MXK9 166 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 WIPF1O43516 503 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 TUSC2O75896 110 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 PPYP01298 95 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 PPIAL4GP0DN37 164 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 IGHV3-43DP0DP04 118 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 CEACAM6P40199 344 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 DLX6P56179 175 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 HERV-K104P61576 105 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 HTD2P86397 168 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 GNMTQ14749 295 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 KRTAP24-1Q3LI83 254 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 TMEM30BQ3MIR4 351 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 DHRS11Q6UWP2 260 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 H1FOOQ8IZA3 346 aaPredicted RBP9.11□□□□□ -0.95
SF3B3-205ENST00000564899 LY6G5BQ8NDX9 201 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 OR10V1Q8NGI7 309 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 MRGPRFQ96AM1 343 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 CREB3L1Q96BA8 519 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 UPRTQ96BW1 309 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 MOB3AQ96BX8 217 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 SLC25A21Q9BQT8 299 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms