RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 IAH1Q2TAA2 248 aaPredicted RBP10.76□□□□□ -0.69
SNX1-211ENST00000560829 C4orf17Q53FE4 359 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 ESCO2Q56NI9 601 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 PRSS54Q6PEW0 395 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 LYZL2Q7Z4W2 148 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 ZNF808Q8N4W9 903 aaPredicted RBP10.76□□□□□ -0.69
SNX1-211ENST00000560829 KCNRGQ8N5I3 272 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 GALNT11Q8NCW6 608 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 OR8H1Q8NGG4 311 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 UBALD1Q8TB05 177 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 IL22RA2Q969J5 263 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 GAFA1Q96PS6 74 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 ARL6Q9H0F7 186 aa10.76□□□□□ -0.69
SNX1-211ENST00000560829 SPINT2O43291 252 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 ATP6V1G1O75348 118 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 PLAUP00749 431 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 PET100P0DJ07 73 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 AGAP20933 346 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 EDDM3AQ14507 147 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 SWI5Q1ZZU3 235 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 ZNF672Q499Z4 452 aaPredicted RBP10.75□□□□□ -0.69
SNX1-211ENST00000560829 ACOT7LQ6ZUV0 252 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 TGIF2LYQ8IUE0 185 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 C1orf87Q8N0U7 546 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 ZCCHC24Q8N2G6 241 aaKnown RBP10.75□□□□□ -0.69
SNX1-211ENST00000560829 ZNF680Q8NEM1 530 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 FAM216AQ8WUB2 273 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 PARP12Q9H0J9 701 aaKnown RBP10.75□□□□□ -0.69
SNX1-211ENST00000560829 ZNF665Q9H7R5 613 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 DYNLRB1Q9NP97 96 aa10.75□□□□□ -0.69
SNX1-211ENST00000560829 CISD1Q9NZ45 108 aaKnown RBP10.75□□□□□ -0.69
SNX1-211ENST00000560829 UBE2J1Q9Y385 318 aaPredicted RBP10.75□□□□□ -0.69
SNX1-211ENST00000560829 PIGBOS1A0A0B4J2F0 54 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 TMEM178BH3BS89 294 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 LGALS8O00214 317 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 SIGLEC5O15389 551 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 CGB3P0DN86 165 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 CGB7P0DN87 165 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 SSTR5P35346 364 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 RAB32Q13637 225 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 SLC35G3Q8N808 338 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 ZBTB34Q8NCN2 500 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 OR52L2PQ8NGH6 319 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 NINJ1Q92982 152 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 ARL11Q969Q4 196 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 C14orf79Q96F83 325 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 DCAF16Q9NXF7 216 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 OR6C3Q9NZP0 311 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 RELNP78509 3460 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 OR8U9P0C7N5 309 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 TMEM268Q5VZI3 342 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 SELENOHQ8IZQ5 122 aaKnown RBP10.74□□□□□ -0.69
SNX1-211ENST00000560829 ZNF645Q8N7E2 425 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 OR8U1Q8NH10 309 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 GSKIPQ9P0R6 139 aa10.74□□□□□ -0.69
SNX1-211ENST00000560829 TRAV38-1A0A0B4J264 116 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 CLEC18AA5D8T8 446 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 F2RL2O00254 374 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 RP2O75695 350 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 IFNA7P01567 189 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 GNMTQ14749 295 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 MEX3BQ6ZN04 569 aaKnown RBP10.73□□□□□ -0.69
SNX1-211ENST00000560829 ZNF695Q8IW36 515 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 INO80EQ8NBZ0 244 aaPredicted RBP10.73□□□□□ -0.69
SNX1-211ENST00000560829 CLEC18CQ8NCF0 446 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 RBPMSQ93062 196 aaKnown RBP10.73□□□□□ -0.69
SNX1-211ENST00000560829 CNTNAP3BQ96NU0 1288 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 DCTN5Q9BTE1 182 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 CNTNAP3Q9BZ76 1288 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 OR2S2Q9NQN1 319 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 TMEM106BQ9NUM4 274 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 JPT1Q9UK76 154 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 RBM7Q9Y580 266 aaKnown RBP10.73□□□□□ -0.69
SNX1-211ENST00000560829 PKD1L2Q7Z442 2459 aa10.73□□□□□ -0.69
SNX1-211ENST00000560829 PPIAL4EA0A075B759 164 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 A0A1B0GW55 424 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 PPIAL4DF5H284 164 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 TNFSF12O43508 249 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 CLDN14O95500 239 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 CFDP00746 253 aaPredicted RBP10.72□□□□□ -0.69
SNX1-211ENST00000560829 GYPAP02724 150 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 DUX4L2P0CJ85 424 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 DUX4L3P0CJ86 424 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 DUX4L4P0CJ87 422 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 DUX4L5P0CJ88 424 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 DUX4L6P0CJ89 424 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 DUX4L7P0CJ90 424 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 PPIAL4FP0DN26 164 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 SELLP14151 372 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 EXOSC2Q13868 293 aaKnown RBP10.72□□□□□ -0.69
SNX1-211ENST00000560829 DUX4L9Q6RFH8 374 aaPredicted RBP10.72□□□□□ -0.69
SNX1-211ENST00000560829 SLC51BQ86UW2 128 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 MUC15Q8N387 334 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 DRAM1Q8N682 238 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 DEFB108BQ8NET1 73 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 DCUN1D4Q92564 292 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 GPHA2Q96T91 129 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 CCL13Q99616 98 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 RAB9BQ9NP90 201 aa10.72□□□□□ -0.69
SNX1-211ENST00000560829 ZFP57Q9NU63 452 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms