RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 SVILO95425 2214 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 ALPK2Q86TB3 2170 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 UTP20O75691 2785 aaKnown RBP7.36□□□□□ -1.23
CCDC33-209ENST00000560565 TRBV23-1A0A0A0MS06 115 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 IGKV1-9A0A0C4DH69 117 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 RNF212BA8MTL3 300 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 FAM90A26D6RGX4 464 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 MASP2O00187 686 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 PPYP01298 95 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 QDPRP09417 244 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 HLA-DOBP13765 273 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 IL2RGP31785 369 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 OTX1P32242 354 aaPredicted RBP7.36□□□□□ -1.23
CCDC33-209ENST00000560565 PTGDSP41222 190 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 PSMB3P49720 205 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 PDLIM4P50479 330 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 NUTF2P61970 127 aaKnown RBP7.36□□□□□ -1.23
CCDC33-209ENST00000560565 HIST1H3AP68431 136 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 ID3Q02535 119 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 FOXF1Q12946 379 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 MYBPHQ13203 477 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 TMEM241Q24JQ0 296 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 C4orf17Q53FE4 359 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 NCR3LG1Q68D85 454 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 ZNF787Q6DD87 383 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 SPSB3Q6PJ21 355 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 FIP1L1Q6UN15 594 aaKnown RBP7.36□□□□□ -1.23
CCDC33-209ENST00000560565 CYP2G1PQ6ZSU1 146 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 LILRB2Q8N423 598 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 SLC35G3Q8N808 338 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 FADS6Q8N9I5 356 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 BHLHE23Q8NDY6 225 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 OR10G3Q8NGC4 313 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 OR5L1Q8NGL2 311 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 OR5C1Q8NGR4 320 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 ZNF775Q96BV0 537 aaPredicted RBP7.36□□□□□ -1.23
CCDC33-209ENST00000560565 FBXO17Q96EF6 278 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 HIST1H2BLQ99880 126 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 PYGO2Q9BRQ0 406 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 SF3B5Q9BWJ5 86 aaKnown RBP7.36□□□□□ -1.23
CCDC33-209ENST00000560565 MAGT1Q9H0U3 335 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 CALHM2Q9HA72 323 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 WFDC1Q9HC57 220 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 PNRC2Q9NPJ4 139 aaKnown RBP7.36□□□□□ -1.23
CCDC33-209ENST00000560565 MED29Q9NX70 200 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 CHCHD2Q9Y6H1 151 aaPredicted RBP7.36□□□□□ -1.23
CCDC33-209ENST00000560565 NF1P21359 2839 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 ESPL1Q14674 2120 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 CENPEQ02224 2701 aa7.36□□□□□ -1.23
CCDC33-209ENST00000560565 SPTBN1Q01082 2364 aaKnown RBP7.35□□□□□ -1.23
CCDC33-209ENST00000560565 ZNF407Q9C0G0 2248 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 TRAV9-1A0A075B6T8 112 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 A0A1B0GWJ7 208 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 ZNF727A8MUV8 499 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 A8MWP6 167 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 NPIPA2E9PIF3 369 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 NPIPA3F8WFD2 350 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 H7BYZ3 331 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 XRCC2O43543 280 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 TRAF3IP2O43734 574 aaPredicted RBP7.35□□□□□ -1.23
CCDC33-209ENST00000560565 RAMP1O60894 148 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 TYMSP04818 313 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 ZNF17P17021 662 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 NPBWR2P48146 333 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 IDH3GP51553 393 aaPredicted RBP7.35□□□□□ -1.23
CCDC33-209ENST00000560565 CEBPGP53567 150 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 RAB11AP62491 216 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 MRPS34P82930 218 aaKnown RBP7.35□□□□□ -1.23
CCDC33-209ENST00000560565 TLE1Q04724 770 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 Q0VFX4 171 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 GAGE1Q13065 139 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 GAMTQ14353 236 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 HYAL4Q2M3T9 481 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 PLPPR5Q32ZL2 321 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 TMEM41BQ5BJD5 291 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 C16orf47Q6ZP98 133 aaPredicted RBP7.35□□□□□ -1.23
CCDC33-209ENST00000560565 C6orf201Q7Z4U5 140 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 OR2M3Q8NG83 312 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 TMEM170AQ8WVE7 144 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 PSMF1Q92530 271 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 TMEM54Q969K7 222 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 LSM10Q969L4 123 aaKnown RBP7.35□□□□□ -1.23
CCDC33-209ENST00000560565 ADGRG7Q96K78 797 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 TMEM68Q96MH6 324 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 NKX3-1Q99801 234 aaPredicted RBP7.35□□□□□ -1.23
CCDC33-209ENST00000560565 GPR61Q9BZJ8 451 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 RTN4RQ9BZR6 473 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 SH3BGRL3Q9H299 93 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 OR51I2Q9H344 312 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 C11orf1Q9H5F2 150 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 SDF2L1Q9HCN8 221 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 PLA2G2EQ9NZK7 142 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 MCTS1Q9ULC4 181 aaKnown RBP7.35□□□□□ -1.23
CCDC33-209ENST00000560565 MRPS18CQ9Y3D5 142 aaKnown RBP7.35□□□□□ -1.23
CCDC33-209ENST00000560565 MED12Q93074 2177 aa7.35□□□□□ -1.23
CCDC33-209ENST00000560565 GTF3C1Q12789 2109 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 USP9YO00507 2555 aaPredicted RBP7.34□□□□□ -1.23
CCDC33-209ENST00000560565 TGIF2-C20orf24A0A0A6YYL0 155 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 OR6C6A6NF89 314 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 H0YL77 283 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms