RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 GLTPQ9NZD2 209 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 ENOPH1Q9UHY7 261 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 FBXO5Q9UKT4 447 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 BTRCQ9Y297 605 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 SLC22A7Q9Y694 548 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 V9GYQ6 96 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 TGIF2-C20orf24A0A0A6YYL0 155 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 C5orf49A4QMS7 147 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 EVPLLA8MZ36 301 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 ZNF207O43670 478 aaKnown RBP2.28□□□□□ -2.04
SPG11-218ENST00000559754 POP7O75817 140 aaKnown RBP2.28□□□□□ -2.04
SPG11-218ENST00000559754 KCNK2O95069 426 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 HAND1O96004 215 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 OR5G3P0C626 314 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 C1GALT1C1LP0DN25 315 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 GTF2F2P13984 249 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 ZNF708P17019 499 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 IL1RNP18510 177 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 MPIP34949 423 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 ZNF83P51522 516 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 SPCS3P61009 180 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 RAB14P61106 215 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 POLR2GP62487 172 aaKnown RBP eCLIP2.28□□□□□ -2.04
SPG11-218ENST00000559754 FABP5Q01469 135 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 TMEM97Q5BJF2 176 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 ELP2Q6IA86 826 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 LCN8Q6JVE9 175 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 NEGR1Q7Z3B1 354 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 OR6V1Q8N148 313 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 TMEM86BQ8N661 226 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 OR2Z1Q8NG97 314 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 OR52N1Q8NH53 320 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 OR2V1Q8NHB1 315 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 SPPL2BQ8TCT7 592 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 SLC35B4Q969S0 331 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 SLC25A46Q96AG3 418 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 GALMQ96C23 342 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 SLC35G5Q96KT7 338 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 CEP19Q96LK0 163 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 MS4A8Q9BY19 250 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 ZNF355PQ9NSJ1 428 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 LINC00527Q9UJ94 153 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 ZNF222Q9UK12 451 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 HDGFL3Q9Y3E1 203 aa2.28□□□□□ -2.04
SPG11-218ENST00000559754 ZBED9Q6R2W3 1325 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 ZNF532Q9HCE3 1301 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.27□□□□□ -2.05
SPG11-218ENST00000559754 A0A096LNJ9 63 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 IGHV1-45A0A0A0MS14 117 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 IGHV1-3A0A0C4DH29 117 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 PGRMC1O00264 195 aaKnown RBP2.27□□□□□ -2.05
SPG11-218ENST00000559754 RGS5O15539 181 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 CHP2O43745 196 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 OR2B3O76000 313 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 OR4E1P0C645 316 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 OR12D1P0DN82 309 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 ZNF823P16415 610 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 G0S2P27469 103 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 OPRK1P41145 380 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 MARCKSL1P49006 195 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 PSMB3P49720 205 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 CMC4P56277 68 aaPredicted RBP2.27□□□□□ -2.05
SPG11-218ENST00000559754 IFITM2Q01629 132 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 TRMT12Q53H54 448 aaKnown RBP2.27□□□□□ -2.05
SPG11-218ENST00000559754 MESTQ5EB52 335 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 MRPL2Q5T653 305 aaKnown RBP2.27□□□□□ -2.05
SPG11-218ENST00000559754 FAM78BQ5VT40 261 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 TMEM42Q69YG0 159 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 ZFP1Q6P2D0 407 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 ZNF550Q7Z398 422 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 MARCH3Q86UD3 253 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 ZBTB8OSQ8IWT0 167 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 ARIH2OSQ8N7S6 290 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 OR9I1Q8NGQ6 314 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 OR1L8Q8NGR8 309 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 ZNRF2Q8NHG8 242 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 LINC01560Q8TB33 94 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 CIRBP-AS1Q8TBR5 109 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 ACY3Q96HD9 319 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 NDFIP1Q9BT67 221 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 GNB1LQ9BYB4 327 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 PAQR5Q9NXK6 330 aaPredicted RBP2.27□□□□□ -2.05
SPG11-218ENST00000559754 C21orf62Q9NYP8 219 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 ZNF391Q9UJN7 358 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 CDC42BPBQ9Y5S2 1711 aa2.27□□□□□ -2.05
SPG11-218ENST00000559754 COL27A1Q8IZC6 1860 aaPredicted RBP2.26□□□□□ -2.05
SPG11-218ENST00000559754 SVILO95425 2214 aa2.26□□□□□ -2.05
SPG11-218ENST00000559754 ANKRD12Q6UB98 2062 aa2.26□□□□□ -2.05
SPG11-218ENST00000559754 PBRM1Q86U86 1689 aa2.26□□□□□ -2.05
SPG11-218ENST00000559754 THSD7AQ9UPZ6 1657 aa2.26□□□□□ -2.05
SPG11-218ENST00000559754 IGLV3-16A0A075B6K0 115 aa2.26□□□□□ -2.05
SPG11-218ENST00000559754 TRAV8-1A0A0A6YYK1 113 aa2.26□□□□□ -2.05
SPG11-218ENST00000559754 OR5K4A6NMS3 321 aa2.26□□□□□ -2.05
SPG11-218ENST00000559754 DISC1C4P0D8 188 aa2.26□□□□□ -2.05
SPG11-218ENST00000559754 H3BSA7 217 aa2.26□□□□□ -2.05
SPG11-218ENST00000559754 NOS1APO75052 506 aaPredicted RBP2.26□□□□□ -2.05
SPG11-218ENST00000559754 CNIH1O95406 144 aa2.26□□□□□ -2.05
SPG11-218ENST00000559754 CXorf1O96002 111 aa2.26□□□□□ -2.05
SPG11-218ENST00000559754 HLA-DQB1P01920 261 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms