RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 B4DEV8 164 aa2.55□□□□□ -2
TDP1-217ENST00000557782 H0YJX3 145 aa2.55□□□□□ -2
TDP1-217ENST00000557782 CHP2O43745 196 aa2.55□□□□□ -2
TDP1-217ENST00000557782 ATRNO75882 1429 aa2.55□□□□□ -2
TDP1-217ENST00000557782 SVILO95425 2214 aa2.55□□□□□ -2
TDP1-217ENST00000557782 CST2P09228 141 aa2.55□□□□□ -2
TDP1-217ENST00000557782 FBP1P09467 338 aa2.55□□□□□ -2
TDP1-217ENST00000557782 FAM228BP0C875 321 aa2.55□□□□□ -2
TDP1-217ENST00000557782 ZNF823P16415 610 aa2.55□□□□□ -2
TDP1-217ENST00000557782 CD36P16671 472 aa2.55□□□□□ -2
TDP1-217ENST00000557782 OPRK1P41145 380 aa2.55□□□□□ -2
TDP1-217ENST00000557782 OR1E2P47887 323 aa2.55□□□□□ -2
TDP1-217ENST00000557782 MARCKSL1P49006 195 aa2.55□□□□□ -2
TDP1-217ENST00000557782 TMEM267Q0VDI3 215 aaPredicted RBP2.55□□□□□ -2
TDP1-217ENST00000557782 POU6F1Q14863 301 aa2.55□□□□□ -2
TDP1-217ENST00000557782 JOSD1Q15040 202 aaPredicted RBP2.55□□□□□ -2
TDP1-217ENST00000557782 ACOT6Q3I5F7 207 aaPredicted RBP2.55□□□□□ -2
TDP1-217ENST00000557782 LIN52Q52LA3 116 aa2.55□□□□□ -2
TDP1-217ENST00000557782 LUZP6Q538Z0 58 aa2.55□□□□□ -2
TDP1-217ENST00000557782 MRPL2Q5T653 305 aaKnown RBP2.55□□□□□ -2
TDP1-217ENST00000557782 TMEM42Q69YG0 159 aa2.55□□□□□ -2
TDP1-217ENST00000557782 ZFP1Q6P2D0 407 aa2.55□□□□□ -2
TDP1-217ENST00000557782 DHRS4L2Q6PKH6 230 aa2.55□□□□□ -2
TDP1-217ENST00000557782 WDR86Q86TI4 376 aa2.55□□□□□ -2
TDP1-217ENST00000557782 MARCH3Q86UD3 253 aa2.55□□□□□ -2
TDP1-217ENST00000557782 CALHM3Q86XJ0 350 aa2.55□□□□□ -2
TDP1-217ENST00000557782 TMEM86BQ8N661 226 aa2.55□□□□□ -2
TDP1-217ENST00000557782 TMEM75Q8N9X5 138 aa2.55□□□□□ -2
TDP1-217ENST00000557782 LINC01560Q8TB33 94 aa2.55□□□□□ -2
TDP1-217ENST00000557782 SLC25A46Q96AG3 418 aa2.55□□□□□ -2
TDP1-217ENST00000557782 SIGMAR1Q99720 223 aa2.55□□□□□ -2
TDP1-217ENST00000557782 KIFC1Q9BW19 673 aa2.55□□□□□ -2
TDP1-217ENST00000557782 GTSF1LQ9H1H1 148 aa2.55□□□□□ -2
TDP1-217ENST00000557782 PRELID3BQ9Y3B1 194 aa2.55□□□□□ -2
TDP1-217ENST00000557782 ANKRD30AQ9BXX3 1397 aa2.54□□□□□ -2
TDP1-217ENST00000557782 A0A096LNJ9 63 aa2.54□□□□□ -2
TDP1-217ENST00000557782 OR5K4A6NMS3 321 aa2.54□□□□□ -2
TDP1-217ENST00000557782 DISC1C4P0D8 188 aa2.54□□□□□ -2
TDP1-217ENST00000557782 EEF1E1-BLOC1S5C9J1V9 151 aa2.54□□□□□ -2
TDP1-217ENST00000557782 TMX2-CTNND1H3BSU7 103 aa2.54□□□□□ -2
TDP1-217ENST00000557782 RBFOX2O43251 390 aaKnown RBP eCLIP2.54□□□□□ -2
TDP1-217ENST00000557782 EEF1E1O43324 174 aaKnown RBP2.54□□□□□ -2
TDP1-217ENST00000557782 ZNF861PO60384 105 aa2.54□□□□□ -2
TDP1-217ENST00000557782 CIAO1O76071 339 aa2.54□□□□□ -2
TDP1-217ENST00000557782 CD5P06127 495 aa2.54□□□□□ -2
TDP1-217ENST00000557782 OR13C7P0DN81 318 aa2.54□□□□□ -2
TDP1-217ENST00000557782 ORM2P19652 201 aa2.54□□□□□ -2
TDP1-217ENST00000557782 CNTFRP26992 372 aa2.54□□□□□ -2
TDP1-217ENST00000557782 S100A2P29034 98 aa2.54□□□□□ -2
TDP1-217ENST00000557782 TGFBR2P37173 567 aa2.54□□□□□ -2
TDP1-217ENST00000557782 CMC4P56277 68 aaPredicted RBP2.54□□□□□ -2
TDP1-217ENST00000557782 CTBP2P56545 445 aa2.54□□□□□ -2
TDP1-217ENST00000557782 PSME3P61289 254 aa2.54□□□□□ -2
TDP1-217ENST00000557782 HIST1H3AP68431 136 aa2.54□□□□□ -2
TDP1-217ENST00000557782 SARNPP82979 210 aaKnown RBP2.54□□□□□ -2
TDP1-217ENST00000557782 H3F3AP84243 136 aa2.54□□□□□ -2
TDP1-217ENST00000557782 IFITM2Q01629 132 aa2.54□□□□□ -2
TDP1-217ENST00000557782 PRDX4Q13162 271 aa2.54□□□□□ -2
TDP1-217ENST00000557782 PMAIP1Q13794 54 aa2.54□□□□□ -2
TDP1-217ENST00000557782 ZNF79Q15937 498 aa2.54□□□□□ -2
TDP1-217ENST00000557782 IGFL2Q6UWQ7 119 aa2.54□□□□□ -2
TDP1-217ENST00000557782 ZNF550Q7Z398 422 aa2.54□□□□□ -2
TDP1-217ENST00000557782 SMIM15Q7Z3B0 74 aa2.54□□□□□ -2
TDP1-217ENST00000557782 LINC01551Q86U37 167 aa2.54□□□□□ -2
TDP1-217ENST00000557782 C1orf158Q8N1D5 194 aa2.54□□□□□ -2
TDP1-217ENST00000557782 UBL4BQ8N7F7 174 aa2.54□□□□□ -2
TDP1-217ENST00000557782 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.54□□□□□ -2
TDP1-217ENST00000557782 OR2K2Q8NGT1 345 aa2.54□□□□□ -2
TDP1-217ENST00000557782 OR52N1Q8NH53 320 aa2.54□□□□□ -2
TDP1-217ENST00000557782 CIRBP-AS1Q8TBR5 109 aa2.54□□□□□ -2
TDP1-217ENST00000557782 TEX47Q8TBZ9 253 aa2.54□□□□□ -2
TDP1-217ENST00000557782 YIPF5Q969M3 257 aa2.54□□□□□ -2
TDP1-217ENST00000557782 REEP6Q96HR9 211 aa2.54□□□□□ -2
TDP1-217ENST00000557782 GPR82Q96P67 336 aa2.54□□□□□ -2
TDP1-217ENST00000557782 OR52B2Q96RD2 323 aa2.54□□□□□ -2
TDP1-217ENST00000557782 TRIB3Q96RU7 358 aa2.54□□□□□ -2
TDP1-217ENST00000557782 NIPSNAP1Q9BPW8 284 aa2.54□□□□□ -2
TDP1-217ENST00000557782 CMSS1Q9BQ75 279 aaKnown RBP2.54□□□□□ -2
TDP1-217ENST00000557782 MED18Q9BUE0 208 aa2.54□□□□□ -2
TDP1-217ENST00000557782 MS4A8Q9BY19 250 aa2.54□□□□□ -2
TDP1-217ENST00000557782 DCSTAMPQ9H295 470 aa2.54□□□□□ -2
TDP1-217ENST00000557782 FAM96AQ9H5X1 160 aa2.54□□□□□ -2
TDP1-217ENST00000557782 FIS1Q9Y3D6 152 aa2.54□□□□□ -2
TDP1-217ENST00000557782 AGRNO00468 2067 aa2.54□□□□□ -2
TDP1-217ENST00000557782 CAMSAP1Q5T5Y3 1602 aa2.53□□□□□ -2
TDP1-217ENST00000557782 ROCK1Q13464 1354 aa2.53□□□□□ -2
TDP1-217ENST00000557782 KIF15Q9NS87 1388 aa2.53□□□□□ -2
TDP1-217ENST00000557782 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.53□□□□□ -2
TDP1-217ENST00000557782 IGLV3-10A0A075B6K4 115 aa2.53□□□□□ -2
TDP1-217ENST00000557782 A0A087WUJ7 227 aa2.53□□□□□ -2
TDP1-217ENST00000557782 PQLC2LA1A4F0 135 aa2.53□□□□□ -2
TDP1-217ENST00000557782 OR7C2O60412 319 aa2.53□□□□□ -2
TDP1-217ENST00000557782 SRSF10O75494 262 aaKnown RBP2.53□□□□□ -2
TDP1-217ENST00000557782 STK16O75716 305 aa2.53□□□□□ -2
TDP1-217ENST00000557782 CTLA4P16410 223 aa2.53□□□□□ -2
TDP1-217ENST00000557782 ELK1P19419 428 aa2.53□□□□□ -2
TDP1-217ENST00000557782 HSPA9P38646 679 aaKnown RBP2.53□□□□□ -2
TDP1-217ENST00000557782 HERVK_113P63121 156 aa2.53□□□□□ -2
TDP1-217ENST00000557782 CDK10Q15131 360 aa2.53□□□□□ -2
TDP1-217ENST00000557782 DEFB116Q30KQ4 102 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms