RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TMEM138Q9NPI0 162 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 SPANXA1Q9NS26 97 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 RBM22Q9NW64 420 aaKnown RBP eCLIP2.09□□□□□ -2.07
TRAV28-201ENST00000557548 DNAJC27Q9NZQ0 273 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 DOK5Q9P104 306 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF222Q9UK12 451 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 VPREB3Q9UKI3 123 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 OR52A1Q9UKL2 312 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.09□□□□□ -2.07
TRAV28-201ENST00000557548 FAM32AQ9Y421 112 aaKnown RBP2.09□□□□□ -2.07
TRAV28-201ENST00000557548 HSPB11Q9Y547 144 aa2.09□□□□□ -2.07
TRAV28-201ENST00000557548 PIK3C2BO00750 1634 aa2.09□□□□□ -2.08
TRAV28-201ENST00000557548 DEPDC5O75140 1603 aa2.09□□□□□ -2.08
TRAV28-201ENST00000557548 RNF17Q9BXT8 1623 aaKnown RBP2.09□□□□□ -2.08
TRAV28-201ENST00000557548 A0A1W2PP64 1363 aa2.09□□□□□ -2.08
TRAV28-201ENST00000557548 RFX7Q2KHR2 1363 aa2.09□□□□□ -2.08
TRAV28-201ENST00000557548 CCDC144AA2RUR9 1427 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 TRAPPC8Q9Y2L5 1435 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 TET2Q6N021 2002 aaPredicted RBP2.08□□□□□ -2.08
TRAV28-201ENST00000557548 PIKFYVEQ9Y2I7 2098 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 GTF3C1Q12789 2109 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 AGLP35573 1532 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 ATP7AQ04656 1500 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 A0A096LNJ9 63 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 IGHV6-1A0A0B4J1U7 121 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 C5orf63A6NC05 138 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 METTL15A6NJ78 407 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF878C9JN71 531 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 C15orf65H3BRN8 121 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 TMX2-CTNND1H3BSU7 103 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 GPR31O00270 319 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 BHLHE40O14503 412 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 CHST10O43529 356 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 CST8O60676 142 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 CCDC22O60826 627 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 ATG12O94817 140 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 CRYZL1O95825 349 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 FAM228BP0C875 321 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 OR13C7P0DN81 318 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 TAC1P20366 129 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 HIST1H1TP22492 207 aaPredicted RBP2.08□□□□□ -2.08
TRAV28-201ENST00000557548 RCVRNP35243 200 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 PSMB2P49721 201 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 SNAP25P60880 206 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 RAB2AP61019 212 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 RBX1P62877 108 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 GNG3P63215 75 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 PSPHP78330 225 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 BAXQ07812 192 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 SYCNQ0VAF6 134 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 SMAGPQ0VAQ4 97 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 APOFQ13790 326 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 WHAMMP3Q1A5X7 153 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 CEACAM16Q2WEN9 425 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 DEFB115Q30KQ5 88 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 KLHL12Q53G59 568 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 C1orf195Q5TG92 126 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 SPNS3Q6ZMD2 512 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 FAM183BPQ6ZVS7 135 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 SLC16A13Q7RTY0 426 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 SLC26A10Q8NG04 563 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 OR13D1Q8NGV5 346 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 OR13C6PQ8NH95 151 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 SLC37A2Q8TED4 501 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 SKA2Q8WVK7 121 aaPredicted RBP2.08□□□□□ -2.08
TRAV28-201ENST00000557548 CYGBQ8WWM9 190 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 PPCDCQ96CD2 204 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF414Q96IQ9 312 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 C18orf15Q96N68 181 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 OLFM3Q96PB7 478 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 OR2M4Q96R27 311 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF382Q96SR6 550 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 CDX2Q99626 313 aaPredicted RBP2.08□□□□□ -2.08
TRAV28-201ENST00000557548 TAPBPLQ9BX59 468 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 SLC17A9Q9BYT1 436 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 PLA2G2FQ9BZM2 168 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 MIXL1Q9H2W2 232 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 TPK1Q9H3S4 243 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 FBXL15Q9H469 300 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 HMG20AQ9NP66 347 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 ENY2Q9NPA8 101 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 PRR34Q9NV39 138 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 TAS2R1Q9NYW7 299 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 GSKIPQ9P0R6 139 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 POLR1DQ9Y2S0 133 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 WSB1Q9Y6I7 421 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 ENPP4Q9Y6X5 453 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 ROBO1Q9Y6N7 1651 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 ADAMTS13Q76LX8 1427 aa2.08□□□□□ -2.08
TRAV28-201ENST00000557548 DENND4BO75064 1496 aaPredicted RBP2.07□□□□□ -2.08
TRAV28-201ENST00000557548 MEGF6O75095 1541 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 GPATCH8Q9UKJ3 1502 aaKnown RBP2.07□□□□□ -2.08
TRAV28-201ENST00000557548 MTCL1Q9Y4B5 1905 aaKnown RBP2.07□□□□□ -2.08
TRAV28-201ENST00000557548 NRXN3Q9Y4C0 1643 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 E9PCH4 1651 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 KDM5AP29375 1690 aaKnown RBP2.07□□□□□ -2.08
TRAV28-201ENST00000557548 CCL15-CCL14A0A0B4J2E2 113 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 RBFOX3A6NFN3 312 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 OR5H1A6NKK0 313 aa2.07□□□□□ -2.08
TRAV28-201ENST00000557548 RFPL4AA6NLU0 287 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms