RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 CHST6Q9GZX3 395 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 PLEKHJ1Q9NW61 149 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 PIPOXQ9P0Z9 390 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 MIOXQ9UGB7 285 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 VSIG4Q9Y279 399 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 MPC1Q9Y5U8 109 aa10.29□□□□□ -0.76
SHMT2-230ENST00000557427 hCG_1807616A0A1W2PRN6 198 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 F5H0A9 414 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-230ENST00000557427 G3V3Q6 166 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 ATP6V1G1O75348 118 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 CRYBA1P05813 215 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 CSN2P05814 226 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 GSTT2P0CG29 244 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 DTYMKP23919 212 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 GABRR1P24046 479 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 CD80P33681 288 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 TAS2R31P59538 309 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 UBE2MP61081 183 aaKnown RBP10.28□□□□□ -0.76
SHMT2-230ENST00000557427 GNB2P62879 340 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 DHODHQ02127 395 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 PAX8Q06710 450 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 MZT1Q08AG7 82 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 Q5BKY6 102 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 RUSC1-AS1Q66K80 236 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 SIGIRRQ6IA17 410 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 ELP2Q6IA86 826 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 C6orf201Q7Z4U5 140 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 TMED4Q7Z7H5 227 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 TMEM17Q86X19 198 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 C12orf45Q8N5I9 185 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-230ENST00000557427 OR2T35Q8NGX2 323 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 TERB2Q8NHR7 220 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 HPSE2Q8WWQ2 592 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 SCGB3A2Q96PL1 93 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 SSBP3Q9BWW4 388 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-230ENST00000557427 MGAT4AQ9UM21 535 aa10.28□□□□□ -0.76
SHMT2-230ENST00000557427 OR5B21A6NL26 309 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 OR2AT4A6NND4 320 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 RGS11O94810 467 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 ZBTB25P24278 435 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 SNU13P55769 128 aaKnown RBP10.27□□□□□ -0.77
SHMT2-230ENST00000557427 RBM11P57052 281 aaKnown RBP10.27□□□□□ -0.77
SHMT2-230ENST00000557427 DHRS2Q13268 280 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 GRK1Q15835 563 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 NHLRC3Q5JS37 347 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 LYG2Q86SG7 212 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 LHFPL1Q86WI0 220 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 CALHM1Q8IU99 346 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 OR11H4Q8NGC9 324 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 OR5AP2Q8NGF4 316 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 OR8B3Q8NGG8 313 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 OR5P3Q8WZ94 311 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 NEIL1Q96FI4 390 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-230ENST00000557427 HIST1H2AAQ96QV6 131 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 OR8B2Q96RD0 313 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 FGF23Q9GZV9 251 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-230ENST00000557427 AURKAIP1Q9NWT8 199 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-230ENST00000557427 HSPB11Q9Y547 144 aa10.27□□□□□ -0.77
SHMT2-230ENST00000557427 IGHV3OR15-7A0A075B7D8 119 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 LGALS8O00214 317 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 PDCD6O75340 191 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 PTBP3O95758 552 aaKnown RBP10.26□□□□□ -0.77
SHMT2-230ENST00000557427 GYPAP02724 150 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 SFTPBP07988 381 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 HLA-GP17693 338 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 ECI1P42126 302 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 OR3A3P47888 321 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 GMFBP60983 142 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 C2orf68Q2NKX9 166 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 NKAPLQ5M9Q1 402 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 LPCAT3Q6P1A2 487 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 Q6YL49 198 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 SLC25A26Q70HW3 274 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 C11orf53Q8IXP5 236 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 MKXQ8IYA7 352 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 TMEM185AQ8NFB2 350 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 GRPEL2Q8TAA5 225 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 MICU1Q9BPX6 476 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 ST6GALNAC5Q9BVH7 336 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 PKIBQ9C010 78 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 PPA2Q9H2U2 334 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 RHOFQ9HBH0 211 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 CLN8Q9UBY8 286 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 AK3Q9UIJ7 227 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 GPR132Q9UNW8 380 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 ST3GAL6Q9Y274 331 aa10.26□□□□□ -0.77
SHMT2-230ENST00000557427 NOTCH3Q9UM47 2321 aa10.25□□□□□ -0.77
SHMT2-230ENST00000557427 DNAH9Q9NYC9 4486 aa10.25□□□□□ -0.77
SHMT2-230ENST00000557427 TANC2Q9HCD6 1990 aa10.25□□□□□ -0.77
SHMT2-230ENST00000557427 TRAV38-1A0A0B4J264 116 aa10.25□□□□□ -0.77
SHMT2-230ENST00000557427 OOEPA6NGQ2 149 aa10.25□□□□□ -0.77
SHMT2-230ENST00000557427 ZNF732B4DXR9 585 aa10.25□□□□□ -0.77
SHMT2-230ENST00000557427 GOSR2O14653 212 aa10.25□□□□□ -0.77
SHMT2-230ENST00000557427 CDIPTO14735 213 aa10.25□□□□□ -0.77
SHMT2-230ENST00000557427 GEMIN2O14893 280 aaKnown RBP10.25□□□□□ -0.77
SHMT2-230ENST00000557427 ADAM20O43506 726 aa10.25□□□□□ -0.77
SHMT2-230ENST00000557427 SLC22A5O76082 557 aa10.25□□□□□ -0.77
SHMT2-230ENST00000557427 OPN1MWP04001 364 aa10.25□□□□□ -0.77
SHMT2-230ENST00000557427 OPN1MW2P0DN77 364 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms