RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ZNF146Q15072 292 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 ALKBH6Q3KRA9 238 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 SDK2Q58EX2 2172 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 Q5BKY6 102 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 SHEQ5VZ18 495 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 ZNF660Q6AZW8 331 aaPredicted RBP3.74□□□□□ -1.81
SRP54-212ENST00000556992 RGS7BPQ6MZT1 257 aaPredicted RBP3.74□□□□□ -1.81
SRP54-212ENST00000556992 SLC22A25Q6T423 547 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 Q6ZWC4 215 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 MOB1BQ7L9L4 216 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 ZNF546Q86UE3 836 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 RTN4RL2Q86UN3 420 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 MYPOPQ86VE0 399 aaPredicted RBP3.74□□□□□ -1.81
SRP54-212ENST00000556992 FAM90A1Q86YD7 464 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 SLC38A6Q8IZM9 456 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 ZNF565Q8N9K5 539 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 CCDC71LQ8N9Z2 235 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 POC1AQ8NBT0 407 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 INO80EQ8NBZ0 244 aaPredicted RBP3.74□□□□□ -1.81
SRP54-212ENST00000556992 OR11H4Q8NGC9 324 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 OR8H1Q8NGG4 311 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 OR5M8Q8NGP6 311 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 THAP6Q8TBB0 222 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 CASTOR1Q8WTX7 329 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 MAFIPQ8WZ33 124 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 RND1Q92730 232 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 SNRNP40Q96DI7 357 aaKnown RBP3.74□□□□□ -1.81
SRP54-212ENST00000556992 FAM210AQ96ND0 272 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 HDHD3Q9BSH5 251 aaPredicted RBP3.74□□□□□ -1.81
SRP54-212ENST00000556992 TLNRD1Q9H1K6 362 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 WDR13Q9H1Z4 485 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 METTL8Q9H825 291 aaKnown RBP3.74□□□□□ -1.81
SRP54-212ENST00000556992 FN3KRPQ9HA64 309 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 PLSCR3Q9NRY6 295 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 ZFP57Q9NU63 452 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 ASF1BQ9NVP2 202 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 KCNIP1Q9NZI2 227 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 LUZP4Q9P127 313 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 TINAGQ9UJW2 476 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 MEMO1Q9Y316 297 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 MGAQ8IWI9 3026 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 PCNX2A6NKB5 2137 aa3.74□□□□□ -1.81
SRP54-212ENST00000556992 TRAV24A0A0B4J272 114 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 TMEM8BA6NDV4 472 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 CRYM-AS1A6NIL9 109 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 FAM25EA8MYX2 175 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 EEF1E1-BLOC1S5C9J1V9 151 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 TSC22D2O75157 780 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 B3GALNT1O75752 331 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 RHBDL1O75783 438 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 OR2F2O95006 317 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 PTBP3O95758 552 aaKnown RBP3.73□□□□□ -1.81
SRP54-212ENST00000556992 OR2H2O95918 312 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 RLN2P04090 185 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 ZNF44P15621 663 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 RPA2P15927 270 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 GZMHP20718 246 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 S100A1P23297 94 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 TNFSF4P23510 183 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 S100A11P31949 105 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 SERPINF1P36955 418 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 NUP62P37198 522 aaPredicted RBP3.73□□□□□ -1.81
SRP54-212ENST00000556992 CD200P41217 278 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 KCNJ3P48549 501 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 THBS3P49746 956 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 KLF3P57682 345 aaPredicted RBP3.73□□□□□ -1.81
SRP54-212ENST00000556992 ERVS71-1P61550 626 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 SNRPD2P62316 118 aaKnown RBP3.73□□□□□ -1.81
SRP54-212ENST00000556992 NKX6-1P78426 367 aaPredicted RBP3.73□□□□□ -1.81
SRP54-212ENST00000556992 SRPXP78539 464 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 SORDQ00796 357 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 FAM27E3Q08E93 113 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 ZNF154Q13106 437 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 OR2F1Q13607 317 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 OPCMLQ14982 345 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 C2orf68Q2NKX9 166 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 ESCO2Q56NI9 601 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 PAN3Q58A45 887 aaKnown RBP3.73□□□□□ -1.81
SRP54-212ENST00000556992 AWAT1Q58HT5 328 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 LY6G6FQ5SQ64 297 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 DCAF12L2Q5VW00 463 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 Q6P435 159 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 ZNF880Q6PDB4 577 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 TEX261Q6UWH6 196 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 ZNF497Q6ZNH5 498 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 C17orf107Q6ZR85 190 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 TMUB2Q71RG4 321 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 C11orf53Q8IXP5 236 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 CMTM1Q8IZ96 169 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 LGI3Q8N145 548 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 GAPTQ8N292 157 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 RPRMLQ8N4K4 120 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 ZNF680Q8NEM1 530 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 NUP37Q8NFH4 326 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 OR2Z1Q8NG97 314 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 OR4A4PQ8NGN8 299 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 OR10Z1Q8NGY1 313 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 OR10J5Q8NHC4 309 aa3.73□□□□□ -1.81
SRP54-212ENST00000556992 RTN4IP1Q8WWV3 396 aaPredicted RBP3.73□□□□□ -1.81
SRP54-212ENST00000556992 RDH5Q92781 318 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms