RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 EDARADDQ8WWZ3 215 aa9.22□□□□□ -0.93
FOXN3-212ENST00000556541 GCDHQ92947 438 aaPredicted RBP9.22□□□□□ -0.93
FOXN3-212ENST00000556541 TBX15Q96SF7 602 aa9.22□□□□□ -0.93
FOXN3-212ENST00000556541 TSC22D3Q99576 134 aa9.22□□□□□ -0.93
FOXN3-212ENST00000556541 C7orf50Q9BRJ6 194 aaKnown RBP9.22□□□□□ -0.93
FOXN3-212ENST00000556541 ST6GALNAC5Q9BVH7 336 aa9.22□□□□□ -0.93
FOXN3-212ENST00000556541 TMEM133Q9H2Q1 129 aa9.22□□□□□ -0.93
FOXN3-212ENST00000556541 PALMDQ9NP74 551 aa9.22□□□□□ -0.93
FOXN3-212ENST00000556541 SLC2A8Q9NY64 477 aa9.22□□□□□ -0.93
FOXN3-212ENST00000556541 ONECUT1Q9UBC0 465 aa9.22□□□□□ -0.93
FOXN3-212ENST00000556541 ZNF230Q9UIE0 474 aaPredicted RBP9.22□□□□□ -0.93
FOXN3-212ENST00000556541 KCNS2Q9ULS6 477 aa9.22□□□□□ -0.93
FOXN3-212ENST00000556541 AUP1Q9Y679 476 aa9.22□□□□□ -0.93
FOXN3-212ENST00000556541 GSTT2P0CG29 244 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 AKAIN1P0CW23 69 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 IL7P13232 177 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 CD99P14209 185 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 ZNF16P17020 682 aaPredicted RBP9.21□□□□□ -0.94
FOXN3-212ENST00000556541 FAUP35544 74 aaKnown RBP9.21□□□□□ -0.94
FOXN3-212ENST00000556541 UBE2E1P51965 193 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 ZNF137PP52743 207 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 ARPC4P59998 168 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 ARF6P62330 175 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 KLF9Q13886 244 aaPredicted RBP9.21□□□□□ -0.94
FOXN3-212ENST00000556541 MORN2Q502X0 79 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 ZNF626Q68DY1 528 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 ZNF660Q6AZW8 331 aaPredicted RBP9.21□□□□□ -0.94
FOXN3-212ENST00000556541 H1FOOQ8IZA3 346 aaPredicted RBP9.21□□□□□ -0.94
FOXN3-212ENST00000556541 MAPK1IP1LQ8NDC0 245 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 ZNF439Q8NDP4 499 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 OR5H2Q8NGV7 314 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 OR9G1Q8NH87 305 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 OR1L1Q8NH94 360 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 OR10J5Q8NHC4 309 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 GIMAP1Q8WWP7 306 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 CREB3L1Q96BA8 519 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 LPAR2Q9HBW0 351 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 OR2S2Q9NQN1 319 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 ING3Q9NXR8 418 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 GAB2Q9UQC2 676 aa9.21□□□□□ -0.94
FOXN3-212ENST00000556541 IGHV2-26A0A0B4J1V2 119 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 TRAV39A0A0B4J263 110 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 NAP1L6A6NFF2 107 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 ODF3BA8MYP8 253 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 SDCBPO00560 298 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-212ENST00000556541 UPK1BO75841 260 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 MMP23AO75900 390 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 SLC22A5O76082 557 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 IGLV1-47P01700 117 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 OR5H8P0DN80 308 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 HOXB4P17483 251 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-212ENST00000556541 OR3A3P47888 321 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 RAB7AP51149 207 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 BAK1Q16611 211 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 MIDNQ504T8 468 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 RNASE10Q5GAN6 216 aaKnown RBP9.2□□□□□ -0.94
FOXN3-212ENST00000556541 MINOS1Q5TGZ0 78 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 PRAMEF5Q5TYX0 476 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 TRIQKQ629K1 86 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 HCP5Q6MZN7 132 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 FAM71F2Q6NXP2 309 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 STEAP1BQ6NZ63 245 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 SLC25A48Q6ZT89 311 aaKnown RBP9.2□□□□□ -0.94
FOXN3-212ENST00000556541 C9orf139Q6ZV77 190 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 VMO1Q7Z5L0 202 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 TMEM17Q86X19 198 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 TOMM5Q8N4H5 51 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 CLEC7AQ9BXN2 247 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 C7orf69Q9H7B7 122 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 MINOS1-NBL1R4GNA1 71 aa9.2□□□□□ -0.94
FOXN3-212ENST00000556541 ZNF469Q96JG9 3925 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-212ENST00000556541 NF1P21359 2839 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 ZANQ9Y493 2812 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 MEIS3P1A6NDR6 274 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 SMAD7O15105 426 aaKnown RBP9.19□□□□□ -0.94
FOXN3-212ENST00000556541 LANCL1O43813 399 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 RAB3DO95716 219 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 CD3DP04234 171 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 HRH1P35367 487 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 ECI1P42126 302 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 PRRX1P54821 245 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 UCP3P55916 312 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 TUSC1Q2TAM9 212 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 PLA1AQ53H76 456 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 IGSF11Q5DX21 431 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 LHFPL1Q86WI0 220 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.19□□□□□ -0.94
FOXN3-212ENST00000556541 RFESDQ8TAC1 157 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 MAFIPQ8WZ33 124 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 BORCS5Q969J3 196 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 GNG12Q9UBI6 72 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 OR2W1Q9Y3N9 320 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 TBL2Q9Y4P3 447 aaKnown RBP9.19□□□□□ -0.94
FOXN3-212ENST00000556541 AMMECR1Q9Y4X0 333 aaPredicted RBP9.19□□□□□ -0.94
FOXN3-212ENST00000556541 CSPG4Q6UVK1 2322 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 ACANP16112 2415 aa9.19□□□□□ -0.94
FOXN3-212ENST00000556541 A8MV72 311 aaPredicted RBP9.18□□□□□ -0.94
FOXN3-212ENST00000556541 OOSP1A8MZH6 123 aa9.18□□□□□ -0.94
FOXN3-212ENST00000556541 RNASEK-C17orf49H0YIS7 233 aa9.18□□□□□ -0.94
FOXN3-212ENST00000556541 J3QR06 171 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms