RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 TMEM222Q9H0R3 208 aa8.18□□□□□ -1.1
TMEM116-216ENST00000552800 ZFP57Q9NU63 452 aa8.18□□□□□ -1.1
TMEM116-216ENST00000552800 UFSP2Q9NUQ7 469 aa8.18□□□□□ -1.1
TMEM116-216ENST00000552800 KCNIP1Q9NZI2 227 aa8.18□□□□□ -1.1
TMEM116-216ENST00000552800 OR6C3Q9NZP0 311 aa8.18□□□□□ -1.1
TMEM116-216ENST00000552800 SH3BGRL2Q9UJC5 107 aa8.18□□□□□ -1.1
TMEM116-216ENST00000552800 TRAPPC2LQ9UL33 140 aa8.18□□□□□ -1.1
TMEM116-216ENST00000552800 PAIP2BQ9ULR5 123 aaKnown RBP8.18□□□□□ -1.1
TMEM116-216ENST00000552800 PPP1R3CQ9UQK1 317 aa8.18□□□□□ -1.1
TMEM116-216ENST00000552800 DIDO1Q9BTC0 2240 aaKnown RBP8.17□□□□□ -1.1
TMEM116-216ENST00000552800 TRAV38-1A0A0B4J264 116 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 IGKV1D-13A0A0B4J2D9 117 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 A0A0D9SG52 128 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 LRRC30A6NM36 301 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 C12orf77C9JDV5 145 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 SMLR1H3BR10 107 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 PGLYRP1O75594 196 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-216ENST00000552800 OR2F2O95006 317 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 MPC2O95563 127 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 IGKV1-13P0DP09 117 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 VAMP1P23763 118 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 F2RP25116 425 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 RBMXP38159 391 aaKnown RBP8.17□□□□□ -1.1
TMEM116-216ENST00000552800 TLE1Q04724 770 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 MEF2CQ06413 473 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-216ENST00000552800 AESQ08117 197 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 BAMBIQ13145 260 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 OR2F1Q13607 317 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 ZNF818PQ6ZRF7 136 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 DTX2Q86UW9 622 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 CMTM1Q8IZ96 169 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 LGI3Q8N145 548 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 ASCC1Q8N9N2 400 aaKnown RBP8.17□□□□□ -1.1
TMEM116-216ENST00000552800 OR10V1Q8NGI7 309 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 GRPEL2Q8TAA5 225 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 LINC01560Q8TB33 94 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 PPP1R1CQ8WVI7 109 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 ITLN2Q8WWU7 325 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-216ENST00000552800 DACT3Q96B18 629 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-216ENST00000552800 WDR89Q96FK6 387 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-216ENST00000552800 MRPL18Q9H0U6 180 aaKnown RBP8.17□□□□□ -1.1
TMEM116-216ENST00000552800 ZNF665Q9H7R5 613 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 TAS2R3Q9NYW6 316 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 DNAJB11Q9UBS4 358 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 KIF25Q9UIL4 384 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 TNFSF18Q9UNG2 199 aa8.17□□□□□ -1.1
TMEM116-216ENST00000552800 UBE2J1Q9Y385 318 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-216ENST00000552800 ADGRG4Q8IZF6 3080 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 C3orf85A0A1B0GTC6 90 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 hCG_1807616A0A1W2PRN6 198 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 ODAMA1E959 279 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 H0Y980 276 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 SIX6O95475 246 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 HBZP02008 142 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 CXCL2P19875 107 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 PI3P19957 117 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 LUMP51884 338 aaPredicted RBP8.16□□□□□ -1.1
TMEM116-216ENST00000552800 P2RX3P56373 397 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 LOXL3P58215 753 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 ABCA11PQ4W5N1 156 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 KRBOX4Q5JUW0 171 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 C11orf71Q6IPW1 123 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 VHLLQ6RSH7 139 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 ANKHD1Q8IWZ3 2542 aaKnown RBP8.16□□□□□ -1.1
TMEM116-216ENST00000552800 BATF2Q8N1L9 274 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 KCNRGQ8N5I3 272 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 LSM10Q969L4 123 aaKnown RBP8.16□□□□□ -1.1
TMEM116-216ENST00000552800 C14orf79Q96F83 325 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 GAFA1Q96PS6 74 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 SLC5A7Q9GZV3 580 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 PLSCR3Q9NRY6 295 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 RDH8Q9NYR8 311 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 CISD1Q9NZ45 108 aaKnown RBP8.16□□□□□ -1.1
TMEM116-216ENST00000552800 JPT1Q9UK76 154 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 HSPB11Q9Y547 144 aa8.16□□□□□ -1.1
TMEM116-216ENST00000552800 ITPR1Q14643 2758 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 RNF222A6NCQ9 220 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 NKX2-6A6NCS4 301 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 PITX3O75364 302 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 FBXO24O75426 580 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 IFNA21P01568 189 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 OR5AC1P0C628 307 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 DANCRP0C864 163 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 IRF2P14316 349 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 VDAC1P21796 283 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 S100GP29377 79 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 S100A11P31949 105 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 GLIPR1P48060 266 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 ARHGDIBP52566 201 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 ATXN7L3Q14CW9 347 aaPredicted RBP8.15□□□□□ -1.1
TMEM116-216ENST00000552800 C17orf58Q2M2W7 97 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 MORN2Q502X0 79 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 PRSS54Q6PEW0 395 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 TEX261Q6UWH6 196 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 ACOT7LQ6ZUV0 252 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 TBC1D26Q86UD7 250 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 ZNF546Q86UE3 836 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
TMEM116-216ENST00000552800 ZNF645Q8N7E2 425 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms