RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 LURAP1Q96LR2 239 aa9.62□□□□□ -0.87
RAB5C-208ENST00000551338 VKORC1Q9BQB6 163 aa9.62□□□□□ -0.87
RAB5C-208ENST00000551338 DCTN5Q9BTE1 182 aa9.62□□□□□ -0.87
RAB5C-208ENST00000551338 PFDN2Q9UHV9 154 aa9.62□□□□□ -0.87
RAB5C-208ENST00000551338 AKAP13Q12802 2813 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 C15orf65H3BRN8 121 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 ABCD4O14678 606 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 TAAR5O14804 337 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 IGKV1-39P01597 117 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 IGKV1D-39P04432 117 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 SSTR5P35346 364 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 NKX2-1P43699 371 aaPredicted RBP9.61□□□□□ -0.87
RAB5C-208ENST00000551338 P2RY1P47900 373 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 SELENOVP59797 346 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 BSPH1Q075Z2 132 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 EIF4EBP1Q13541 118 aaPredicted RBP9.61□□□□□ -0.87
RAB5C-208ENST00000551338 FAM201AQ5SY85 155 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 RPL7L1Q6DKI1 246 aaKnown RBP9.61□□□□□ -0.87
RAB5C-208ENST00000551338 TRAT1Q6PIZ9 186 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 SSX8Q7RTT4 187 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 HSD17B13Q7Z5P4 300 aaPredicted RBP9.61□□□□□ -0.87
RAB5C-208ENST00000551338 ERGIC1Q969X5 290 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 GALMQ96C23 342 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 OR2S2Q9NQN1 319 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 ZC4H2Q9NQZ6 224 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 IL19Q9UHD0 177 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 PPP1R3CQ9UQK1 317 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 RBM7Q9Y580 266 aaKnown RBP9.61□□□□□ -0.87
RAB5C-208ENST00000551338 DMXL1Q9Y485 3027 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 HCFC1P51610 2035 aa9.61□□□□□ -0.87
RAB5C-208ENST00000551338 TRGV8A0A0C4DH27 118 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 ODAMA1E959 279 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 TEX46H3BTG2 121 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 MGST3O14880 152 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 ATXN7O15265 892 aaPredicted RBP9.6□□□□□ -0.87
RAB5C-208ENST00000551338 PITX3O75364 302 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 GAPDHP04406 335 aaKnown RBP9.6□□□□□ -0.87
RAB5C-208ENST00000551338 ADH4P08319 380 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 FGF2P09038 288 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 CA7P43166 264 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 ASCL1P50553 236 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 POLR2GP62487 172 aaKnown RBP eCLIP9.6□□□□□ -0.87
RAB5C-208ENST00000551338 KLRB1Q12918 225 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 EDDM3AQ14507 147 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 MSMO1Q15800 293 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 ADIPOQQ15848 244 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 CR1LQ2VPA4 569 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 ZNF585BQ52M93 769 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 THOC7Q6I9Y2 204 aaKnown RBP9.6□□□□□ -0.87
RAB5C-208ENST00000551338 ZNF645Q8N7E2 425 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 ZBTB34Q8NCN2 500 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 ANGPTL6Q8NI99 470 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 PPP1R35Q8TAP8 253 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 Q8TCH9 128 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 TMED6Q8WW62 240 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 ARL11Q969Q4 196 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 GPR146Q96CH1 333 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 SMIM3Q9BZL3 60 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 ESRP2Q9H6T0 727 aaKnown RBP9.6□□□□□ -0.87
RAB5C-208ENST00000551338 GCM1Q9NP62 436 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 LIN7CQ9NUP9 197 aaKnown RBP9.6□□□□□ -0.87
RAB5C-208ENST00000551338 RNF7Q9UBF6 113 aa9.6□□□□□ -0.87
RAB5C-208ENST00000551338 IGHV3-43A0A0B4J1X8 118 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 A0A1B0GW55 424 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 K7N7A8 449 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 CYB5R3P00387 301 aaPredicted RBP9.59□□□□□ -0.87
RAB5C-208ENST00000551338 IGKV1-5P01602 117 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 CD55P08174 381 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 DUX4L2P0CJ85 424 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 DUX4L3P0CJ86 424 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 DUX4L4P0CJ87 422 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 DUX4L5P0CJ88 424 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 DUX4L6P0CJ89 424 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 DUX4L7P0CJ90 424 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 IGHV3-43DP0DP04 118 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 SELLP14151 372 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 PPP1CCP36873 323 aaKnown RBP9.59□□□□□ -0.87
RAB5C-208ENST00000551338 TMEM33P57088 247 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 EIF5AP63241 154 aaKnown RBP9.59□□□□□ -0.87
RAB5C-208ENST00000551338 CXorf66Q5JRM2 361 aaPredicted RBP9.59□□□□□ -0.87
RAB5C-208ENST00000551338 GPR157Q5UAW9 335 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 STUMQ69YW2 141 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 ADAM5Q6NVV9 412 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 CLEC9AQ6UXN8 241 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 EIF4E3Q8N5X7 224 aaKnown RBP9.59□□□□□ -0.87
RAB5C-208ENST00000551338 LSM10Q969L4 123 aaKnown RBP9.59□□□□□ -0.87
RAB5C-208ENST00000551338 WFIKKN1Q96NZ8 548 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 OR2D2Q9H210 308 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 ARV1Q9H2C2 271 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 PLEKHF2Q9H8W4 249 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 WFDC1Q9HC57 220 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 PLA2G2EQ9NZK7 142 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 DUX4Q9UBX2 424 aa9.59□□□□□ -0.87
RAB5C-208ENST00000551338 DIDO1Q9BTC0 2240 aaKnown RBP9.58□□□□□ -0.88
RAB5C-208ENST00000551338 PIGBOS1A0A0B4J2F0 54 aa9.58□□□□□ -0.88
RAB5C-208ENST00000551338 MEX3AA1L020 520 aaKnown RBP9.58□□□□□ -0.88
RAB5C-208ENST00000551338 IGSF23A1L1A6 192 aa9.58□□□□□ -0.88
RAB5C-208ENST00000551338 FAM24AA6NFZ4 105 aa9.58□□□□□ -0.88
RAB5C-208ENST00000551338 KIAA1324LA8MWY0 1029 aaPredicted RBP9.58□□□□□ -0.88
RAB5C-208ENST00000551338 A8MXK9 166 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms