RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 KBTBD11-OT1A0A1B0GTJ5 212 aa25.17■■□□□ 1.62
CCM2-219ENST00000544363 F2RL2O00254 374 aa25.17■■□□□ 1.62
CCM2-219ENST00000544363 PIGPP57054 158 aa25.17■■□□□ 1.62
CCM2-219ENST00000544363 C19orf12Q9NSK7 152 aa25.17■■□□□ 1.62
CCM2-219ENST00000544363 LPAR3Q9UBY5 353 aa25.17■■□□□ 1.62
CCM2-219ENST00000544363 CLN8Q9UBY8 286 aa25.17■■□□□ 1.62
CCM2-219ENST00000544363 ZNF729A6NN14 1252 aaPredicted RBP25.16■■□□□ 1.62
CCM2-219ENST00000544363 SULT1A3P0DMM9 295 aa25.16■■□□□ 1.62
CCM2-219ENST00000544363 SULT1A4P0DMN0 295 aa25.16■■□□□ 1.62
CCM2-219ENST00000544363 RPS2P15880 293 aaKnown RBP25.16■■□□□ 1.62
CCM2-219ENST00000544363 LUMP51884 338 aaPredicted RBP25.16■■□□□ 1.62
CCM2-219ENST00000544363 GNMTQ14749 295 aa25.16■■□□□ 1.62
CCM2-219ENST00000544363 LDLRAD3Q86YD5 345 aa25.16■■□□□ 1.62
CCM2-219ENST00000544363 SPICQ8N5J4 248 aa25.16■■□□□ 1.62
CCM2-219ENST00000544363 OR11H7Q8NGC8 314 aa25.16■■□□□ 1.62
CCM2-219ENST00000544363 H1FXQ92522 213 aaKnown RBP25.16■■□□□ 1.62
CCM2-219ENST00000544363 PARP12Q9H0J9 701 aaKnown RBP25.16■■□□□ 1.62
CCM2-219ENST00000544363 SLC2A9Q9NRM0 540 aa25.16■■□□□ 1.62
CCM2-219ENST00000544363 GPR6P46095 362 aaPredicted RBP25.15■■□□□ 1.62
CCM2-219ENST00000544363 SUPT4H1P63272 117 aaKnown RBP25.15■■□□□ 1.62
CCM2-219ENST00000544363 ZNF841Q6ZN19 808 aa25.15■■□□□ 1.62
CCM2-219ENST00000544363 C12orf45Q8N5I9 185 aaPredicted RBP25.15■■□□□ 1.62
CCM2-219ENST00000544363 LINC00574Q9H8X3 128 aa25.15■■□□□ 1.62
CCM2-219ENST00000544363 TAS2R3Q9NYW6 316 aa25.15■■□□□ 1.62
CCM2-219ENST00000544363 JPT1Q9UK76 154 aa25.15■■□□□ 1.62
CCM2-219ENST00000544363 IGHV3-43A0A0B4J1X8 118 aa25.15■■□□□ 1.62
CCM2-219ENST00000544363 CRYM-AS1A6NIL9 109 aa25.15■■□□□ 1.62
CCM2-219ENST00000544363 SFT2D2O95562 160 aa25.15■■□□□ 1.62
CCM2-219ENST00000544363 IGHV3-43DP0DP04 118 aa25.15■■□□□ 1.62
CCM2-219ENST00000544363 PHLDA2Q53GA4 152 aa25.15■■□□□ 1.62
CCM2-219ENST00000544363 FAM53AQ6NSI3 398 aaPredicted RBP25.15■■□□□ 1.62
CCM2-219ENST00000544363 ST6GAL2Q96JF0 529 aa25.15■■□□□ 1.62
CCM2-219ENST00000544363 CCL28Q9NRJ3 127 aa25.15■■□□□ 1.62
CCM2-219ENST00000544363 A8MV72 311 aaPredicted RBP25.14■■□□□ 1.61
CCM2-219ENST00000544363 GPR31O00270 319 aa25.14■■□□□ 1.61
CCM2-219ENST00000544363 DUS4LO95620 317 aaKnown RBP25.14■■□□□ 1.61
CCM2-219ENST00000544363 WNT2P09544 360 aa25.14■■□□□ 1.61
CCM2-219ENST00000544363 COL8A1P27658 744 aa25.14■■□□□ 1.61
CCM2-219ENST00000544363 PPP1CCP36873 323 aaKnown RBP25.14■■□□□ 1.61
CCM2-219ENST00000544363 LTC4SQ16873 150 aa25.14■■□□□ 1.61
CCM2-219ENST00000544363 ZNF818PQ6ZRF7 136 aa25.14■■□□□ 1.61
CCM2-219ENST00000544363 NLRC3Q7RTR2 1065 aa25.14■■□□□ 1.61
CCM2-219ENST00000544363 SGPP2Q8IWX5 399 aa25.14■■□□□ 1.61
CCM2-219ENST00000544363 CCDC71LQ8N9Z2 235 aa25.14■■□□□ 1.61
CCM2-219ENST00000544363 OR8B3Q8NGG8 313 aa25.14■■□□□ 1.61
CCM2-219ENST00000544363 CASTOR1Q8WTX7 329 aa25.14■■□□□ 1.61
CCM2-219ENST00000544363 MITD1Q8WV92 249 aa25.14■■□□□ 1.61
CCM2-219ENST00000544363 NEIL1Q96FI4 390 aaPredicted RBP25.14■■□□□ 1.61
CCM2-219ENST00000544363 OR8B2Q96RD0 313 aa25.14■■□□□ 1.61
CCM2-219ENST00000544363 IGHV4-39P01824 125 aa25.13■■□□□ 1.61
CCM2-219ENST00000544363 LOXL3P58215 753 aa25.13■■□□□ 1.61
CCM2-219ENST00000544363 CD83Q01151 205 aa25.13■■□□□ 1.61
CCM2-219ENST00000544363 ZNF273Q14593 569 aa25.13■■□□□ 1.61
CCM2-219ENST00000544363 TMEM200BQ69YZ2 307 aa25.13■■□□□ 1.61
CCM2-219ENST00000544363 UXS1Q8NBZ7 420 aa25.13■■□□□ 1.61
CCM2-219ENST00000544363 RTN4IP1Q8WWV3 396 aaPredicted RBP25.13■■□□□ 1.61
CCM2-219ENST00000544363 RBM7Q9Y580 266 aaKnown RBP25.13■■□□□ 1.61
CCM2-219ENST00000544363 TEX13DA0A0J9YY54 714 aaPredicted RBP25.12■■□□□ 1.61
CCM2-219ENST00000544363 HSD17B6O14756 317 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 GPR37O15354 613 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 OR8U9P0C7N5 309 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 CXCL3P19876 107 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 OMGP23515 440 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 CD34P28906 385 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 FAM185AQ8N0U4 392 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 OR2AK2Q8NG84 335 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 OR8U1Q8NH10 309 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 GNG12Q9UBI6 72 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 RND3P61587 244 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 PHB2Q99623 299 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 GAL3ST2Q9H3Q3 398 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 IDI2-AS1Q9NZ38 188 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 MGAT4CQ9UBM8 478 aa25.12■■□□□ 1.61
CCM2-219ENST00000544363 AKAP6Q13023 2319 aa25.11■■□□□ 1.61
CCM2-219ENST00000544363 TRBV23-1A0A0A0MS06 115 aa25.11■■□□□ 1.61
CCM2-219ENST00000544363 YPEL1O60688 119 aa25.11■■□□□ 1.61
CCM2-219ENST00000544363 SLC9A3R2Q15599 337 aa25.11■■□□□ 1.61
CCM2-219ENST00000544363 MORN2Q502X0 79 aa25.11■■□□□ 1.61
CCM2-219ENST00000544363 C11orf88Q6PI97 169 aa25.11■■□□□ 1.61
CCM2-219ENST00000544363 ZNF525Q8N782 197 aa25.11■■□□□ 1.61
CCM2-219ENST00000544363 ZNF714Q96N38 554 aa25.11■■□□□ 1.61
CCM2-219ENST00000544363 YPEL2Q96QA6 119 aa25.11■■□□□ 1.61
CCM2-219ENST00000544363 NAA60Q9H7X0 242 aa25.11■■□□□ 1.61
CCM2-219ENST00000544363 PATZ1Q9HBE1 687 aaKnown RBP25.11■■□□□ 1.61
CCM2-219ENST00000544363 RANGRFQ9HD47 186 aaPredicted RBP25.11■■□□□ 1.61
CCM2-219ENST00000544363 TMEM30BQ3MIR4 351 aa25.1■■□□□ 1.61
CCM2-219ENST00000544363 CMTM1Q8IZ96 169 aa25.1■■□□□ 1.61
CCM2-219ENST00000544363 BVESQ8NE79 360 aa25.1■■□□□ 1.61
CCM2-219ENST00000544363 GFOD1Q9NXC2 390 aa25.1■■□□□ 1.61
CCM2-219ENST00000544363 KCNIP3Q9Y2W7 256 aa25.1■■□□□ 1.61
CCM2-219ENST00000544363 IFNA2P01563 188 aa25.09■■□□□ 1.61
CCM2-219ENST00000544363 HNRNPCP07910 306 aaKnown RBP eCLIP25.09■■□□□ 1.61
CCM2-219ENST00000544363 WDR25Q64LD2 544 aaPredicted RBP25.09■■□□□ 1.61
CCM2-219ENST00000544363 F5H0A9 414 aaPredicted RBP25.08■■□□□ 1.61
CCM2-219ENST00000544363 MPPED1O15442 326 aa25.08■■□□□ 1.61
CCM2-219ENST00000544363 RGS11O94810 467 aa25.08■■□□□ 1.61
CCM2-219ENST00000544363 OR10A7Q8NGE5 316 aa25.08■■□□□ 1.61
CCM2-219ENST00000544363 OR52M1Q8NGK5 317 aa25.08■■□□□ 1.61
CCM2-219ENST00000544363 EDARADDQ8WWZ3 215 aa25.08■■□□□ 1.61
CCM2-219ENST00000544363 GALNT14Q96FL9 552 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms