RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PPP1CCP36873 323 aaKnown RBP8.64□□□□□ -1.03
TRAF1-202ENST00000540010 IL24Q13007 206 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 C3AR1Q16581 482 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 CXorf66Q5JRM2 361 aaPredicted RBP8.64□□□□□ -1.03
TRAF1-202ENST00000540010 SLC25A47Q6Q0C1 308 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 BTNL3Q6UXE8 466 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 CMTM2Q8TAZ6 248 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 PACRGQ96M98 296 aaPredicted RBP8.64□□□□□ -1.03
TRAF1-202ENST00000540010 TAAR3PQ9P1P4 343 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 DOCK10Q96BY6 2186 aa8.64□□□□□ -1.03
TRAF1-202ENST00000540010 C20orf202A1L168 122 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 KIAA1324LA8MWY0 1029 aaPredicted RBP8.63□□□□□ -1.03
TRAF1-202ENST00000540010 CDIPTO14735 213 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 ACTL6AO96019 429 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 MBPP02686 304 aaPredicted RBP8.63□□□□□ -1.03
TRAF1-202ENST00000540010 THBS3P49746 956 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 CDCP2Q5VXM1 449 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 AQP3Q92482 292 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 ACY3Q96HD9 319 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 GFI1Q99684 422 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 COMMD5Q9GZQ3 224 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 ZMAT5Q9UDW3 170 aaKnown RBP8.63□□□□□ -1.03
TRAF1-202ENST00000540010 LHFPL6Q9Y693 200 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 DHRS7CA6NNS2 312 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 HSBP1O75506 76 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 LYZL6O75951 148 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 CRYAAP02489 173 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 TRGC2P03986 189 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 BCL3P20749 454 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 FAM209BQ5JX69 171 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 STPG1Q5TH74 334 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 SSX7Q7RTT5 188 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 TMEM252Q8N6L7 170 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 EDARADDQ8WWZ3 215 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 RSG1Q9BU20 258 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 HES7Q9BYE0 225 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 SRXN1Q9BYN0 137 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 SLC35D1Q9NTN3 355 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 PRSS50Q9UI38 385 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 KLF13Q9Y2Y9 288 aaPredicted RBP8.63□□□□□ -1.03
TRAF1-202ENST00000540010 WDFY4Q6ZS81 3184 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 H0YL77 283 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 ZNF718Q3SXZ3 478 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 ETV3LQ6ZN32 361 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 SLC25A28Q96A46 364 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 DEPPQ9NTK1 212 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 NAT8BQ9UHF3 227 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 A8MXK9 166 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 UBE2V2Q15819 145 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 ARSJQ5FYB0 599 aaPredicted RBP8.63□□□□□ -1.03
TRAF1-202ENST00000540010 OR2M7Q8NG81 312 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 RNF166Q96A37 237 aaPredicted RBP8.63□□□□□ -1.03
TRAF1-202ENST00000540010 SLC35E1Q96K37 410 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 SIGLEC12Q96PQ1 595 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 LRFN3Q9BTN0 628 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 PARD6AQ9NPB6 346 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 ZNF391Q9UJN7 358 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 FUT9Q9Y231 359 aa8.63□□□□□ -1.03
TRAF1-202ENST00000540010 TOX4O94842 621 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 CDS2O95674 445 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 FCGR3AP08637 254 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 FTH1P19P0C7X4 201 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 IQCJQ1A5X6 159 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 IZUMO4Q1ZYL8 232 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 ATP1A1-AS1Q5TC04 95 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 TUSC5Q8IXB3 177 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 OR2T10Q8NGZ9 312 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 TECTBQ96PL2 329 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 G6PC2Q9NQR9 355 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 A0A1W2PNU3 283 aaPredicted RBP8.62□□□□□ -1.03
TRAF1-202ENST00000540010 TMEM30CPA0ZSE6 113 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 HKR1P10072 659 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 DEFA4P12838 97 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 CDC34P49427 236 aaPredicted RBP8.62□□□□□ -1.03
TRAF1-202ENST00000540010 FAM3AP98173 230 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 ATP5SQ99766 215 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 RARRES2Q99969 163 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 SH3BGRL3Q9H299 93 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 TMEM50BP56557 158 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
TRAF1-202ENST00000540010 CSRP2Q16527 193 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 NSUN5P2Q63ZY6 315 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 GPR61Q9BZJ8 451 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 SH2D2AQ9NP31 389 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 PCNX2A6NKB5 2137 aa8.62□□□□□ -1.03
TRAF1-202ENST00000540010 FCN1O00602 326 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 ISG15P05161 165 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 PSG2P11465 335 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 MAGEA5P43359 124 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 UNC119Q13432 240 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 NUFIP2Q7Z417 695 aaKnown RBP8.61□□□□□ -1.03
TRAF1-202ENST00000540010 C1QL2Q7Z5L3 287 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 OR2Z1Q8NG97 314 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 OR10AD1Q8NGE0 317 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 OR10A7Q8NGE5 316 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 OR52M1Q8NGK5 317 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 ZNF665Q9H7R5 613 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 ARL2-SNX15V9GYD0 113 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 LRRC3CA6NJW4 275 aa8.61□□□□□ -1.03
TRAF1-202ENST00000540010 TRDCB7Z8K6 153 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms