RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CT45A1Q5HYN5 189 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 UBE2NLQ5JXB2 153 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 CCBE1Q6UXH8 406 aaPredicted RBP10.55□□□□□ -0.72
CHFR-216ENST00000538235 ODF3L1Q8IXM7 274 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 ZNF565Q8N9K5 539 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 CT45A3Q8NHU0 189 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 C5orf30Q96GV9 206 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 SLIRPQ9GZT3 109 aaKnown RBP10.55□□□□□ -0.72
CHFR-216ENST00000538235 COMMD3Q9UBI1 195 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 RSL24D1Q9UHA3 163 aaKnown RBP10.55□□□□□ -0.72
CHFR-216ENST00000538235 HILPDAQ9Y5L2 63 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 TRAV18A0A075B6X5 111 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 A0A1W2PPI3 338 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 BUB1B-PAK6H3BSN5 160 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 FCER2P06734 321 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 GZMHP20718 246 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 CD24P25063 80 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 BPIFB3P59826 476 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 BAMBIQ13145 260 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 SSX2Q16385 188 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 IGSF11Q5DX21 431 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 C6orf183Q5T699 404 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 HACD4Q5VWC8 232 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 LAX1Q8IWV1 398 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 GVQW1Q8N7I0 195 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 OR10A7Q8NGE5 316 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 OR52M1Q8NGK5 317 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 OR9G1Q8NH87 305 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 ZNF418Q8TF45 676 aaPredicted RBP10.54□□□□□ -0.72
CHFR-216ENST00000538235 ST6GALNAC6Q969X2 333 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 MEGF9Q9H1U4 602 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 MMP28Q9H239 520 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 IFI27L2Q9H2X8 130 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 AUNIPQ9H7T9 357 aa10.54□□□□□ -0.72
CHFR-216ENST00000538235 CHMP1AQ9HD42 196 aaPredicted RBP10.54□□□□□ -0.72
CHFR-216ENST00000538235 TBL2Q9Y4P3 447 aaKnown RBP10.54□□□□□ -0.72
CHFR-216ENST00000538235 STAB1Q9NY15 2570 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 hCG_1809904A0A1W2PP81 198 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 A0A1W2PPE2 198 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 A0A1W2PR64 198 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 A0A1W2PRV1 198 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 METTL21EPA6NDL7 271 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 MEIS3P1A6NDR6 274 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 SERPINE3A8MV23 424 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 H3BUX3 64 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 CTDSP2O14595 271 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 NOL3O60936 208 aaKnown RBP10.53□□□□□ -0.72
CHFR-216ENST00000538235 HLA-DQB1P01920 261 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 RNASE1P07998 156 aaKnown RBP10.53□□□□□ -0.72
CHFR-216ENST00000538235 FBP1P09467 338 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 GSTT2P0CG29 244 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 GSTT2BP0CG30 244 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 TAS2R20P59543 309 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 MORN2Q502X0 79 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 TPTE2P1Q5T6R2 138 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 OR52W1Q6IF63 320 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 SLC25A48Q6ZT89 311 aaKnown RBP10.53□□□□□ -0.72
CHFR-216ENST00000538235 MOB1BQ7L9L4 216 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 LINC00311Q8N616 119 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 CFHR4Q92496 578 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 SNAPC3Q92966 411 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 KCTD12Q96CX2 325 aaKnown RBP10.53□□□□□ -0.72
CHFR-216ENST00000538235 CABLES2Q9BTV7 478 aa10.53□□□□□ -0.72
CHFR-216ENST00000538235 CLDN34H7C241 214 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 PROP1O75360 226 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 GSTP1P09211 210 aaKnown RBP10.52□□□□□ -0.73
CHFR-216ENST00000538235 ZNF182P17025 639 aaPredicted RBP10.52□□□□□ -0.73
CHFR-216ENST00000538235 REG1BP48304 166 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 RORCP51449 518 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 LY6EQ16553 131 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 KRTAP21-3Q3LHN1 58 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 MINOS1Q5TGZ0 78 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 LINC00299Q6ZSB3 139 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 IL1F10Q8WWZ1 152 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 ZDHHC16Q969W1 377 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 SSX3Q99909 188 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 BCL7BQ9BQE9 202 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 OR2S2Q9NQN1 319 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 CCDC59Q9P031 241 aaKnown RBP10.52□□□□□ -0.73
CHFR-216ENST00000538235 JPT1Q9UK76 154 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 ANAPC10Q9UM13 185 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 MINOS1-NBL1R4GNA1 71 aa10.52□□□□□ -0.73
CHFR-216ENST00000538235 A0A0A6YYJ9 748 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 ZNF736B4DX44 427 aaPredicted RBP10.51□□□□□ -0.73
CHFR-216ENST00000538235 TRDCB7Z8K6 153 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 ST8SIA5O15466 376 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 FABP7O15540 132 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 SPINT2O43291 252 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 XRCC3O43542 346 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 GPR137BO60478 399 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 IFNA2P01563 188 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 HNRNPCP07910 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
CHFR-216ENST00000538235 HTR1DP28221 377 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 OR3A3P47888 321 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 HTD2P86397 168 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 ARFRP1Q13795 201 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 FAM189A2Q15884 450 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 LRRC75BQ2VPJ9 315 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 TRAT1Q6PIZ9 186 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 ZBTB8BQ8NAP8 495 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms