RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 A0A087X0M5 115 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 IGHV2-26A0A0B4J1V2 119 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 A0A1B0GX30 115 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 MEIOCA2RUB1 952 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 TRDCB7Z8K6 153 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 ARG1P05089 322 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 HNRNPCP07910 306 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 FCGR3AP08637 254 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 DTYMKP23919 212 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 CD34P28906 385 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 KIR2DS4P43632 304 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 TAS2R20P59543 309 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 HTD2P86397 168 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 KIR2DS1Q14954 304 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 HMGN3Q15651 99 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 RUSC1-AS1Q66K80 236 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 RBMS3Q6XE24 437 aaKnown RBP9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 C9orf139Q6ZV77 190 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 BCL6BQ8N143 479 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 OR9G1Q8NH87 305 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 OR1L1Q8NH94 360 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 ZNF596Q8TC21 504 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 SRRQ9GZT4 340 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 GNG12Q9UBI6 72 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 EXTL2Q9UBQ6 330 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 ZNF230Q9UIE0 474 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 FAM96BQ9Y3D0 163 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 V9GYH0 126 aa9.16□□□□□ -0.94
TRAPPC4-211ENST00000533012 IGHV3-43A0A0B4J1X8 118 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 FAM172BPA6NC97 362 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 TPPPO94811 219 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 IFNA2P01563 188 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 HLA-DQB1P01920 261 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 SCTP09683 121 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 IGHV3-43DP0DP04 118 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 PRSS3P35030 304 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 CBX5P45973 191 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 LOXL3P58215 753 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 HLA-DRB3P79483 266 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 IL18Q14116 193 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 ZNF626Q68DY1 528 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 PYHIN1Q6K0P9 492 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 Q6ZPA2 131 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 C5orf24Q7Z6I8 188 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 NUDCD2Q8WVJ2 157 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 IL1F10Q8WWZ1 152 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 ZDHHC16Q969W1 377 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 CREB3L1Q96BA8 519 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 OCSTAMPQ9BR26 566 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 MIXL1Q9H2W2 232 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 ZNF286AQ9HBT8 521 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 GFOD1Q9NXC2 390 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 JPT1Q9UK76 154 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 PSG11Q9UQ72 335 aa9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 SOX21Q9Y651 276 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC4-211ENST00000533012 TLN2Q9Y4G6 2542 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 A0A0U1RQK1 487 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 J3QR06 171 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 FABP7O15540 132 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 HSPA12AO43301 675 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 SSX5O60225 188 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 RGS11O94810 467 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 IGHV3-7P01780 117 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 GSTT2P0CG29 244 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 GSTT2BP0CG30 244 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 PTHLHP12272 177 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 IL7P13232 177 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 ZBTB25P24278 435 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 HTR1DP28221 377 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 SAA4P35542 130 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 ASAH1Q13510 395 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 Q3ZCU0 254 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 MORN2Q502X0 79 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 MINOS1Q5TGZ0 78 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 CNIH2Q6PI25 160 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 Q6ZS49 121 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 SNX29P2Q8IUI4 249 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 BEND2Q8NDZ0 799 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 OR52L2PQ8NGH6 319 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 OR10V1Q8NGI7 309 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 OR4A4PQ8NGN8 299 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 ZNF418Q8TF45 676 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 MAFIPQ8WZ33 124 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 LEAP2Q969E1 77 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 MALSU1Q96EH3 234 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 TBL2Q9Y4P3 447 aaKnown RBP9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 MINOS1-NBL1R4GNA1 71 aa9.14□□□□□ -0.95
TRAPPC4-211ENST00000533012 CENPXA8MT69 81 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 ODF3BA8MYP8 253 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 LEUTXA8MZ59 168 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 YPEL1O60688 119 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 IGLV1-47P01700 117 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 FBP1P09467 338 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 CTXN2P0C2S0 81 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 CEACAM3P40198 252 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 CEACAM6P40199 344 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 GNG10P50151 68 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 MRPS10P82664 201 aaKnown RBP9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 IFITM3Q01628 133 aa9.13□□□□□ -0.95
TRAPPC4-211ENST00000533012 DEFB112Q30KQ8 113 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms