RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 HIST1H2BKO60814 126 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 HIST1H2BJP06899 126 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 HIST1H2BOP23527 126 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 F2RP25116 425 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 HIST1H2BBP33778 126 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 GPM6AP51674 278 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 HIST1H2BDP58876 126 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 HIST1H2BCP62807 126 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 ARG2P78540 354 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 HIST2H2BEQ16778 126 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 CEACAM21Q3KPI0 293 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.29■□□□□ 0.04
UBXN1-213ENST00000532904 THNSL2Q86YJ6 484 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 H1FOOQ8IZA3 346 aaPredicted RBP15.29■□□□□ 0.04
UBXN1-213ENST00000532904 HIST1H2BHQ93079 126 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 HIST1H2BNQ99877 126 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 HIST1H2BMQ99879 126 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 MTCH1Q9NZJ7 389 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 PIGBOS1A0A0B4J2F0 54 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 A0A0G2JRQ6 117 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 KIAA1324LA8MWY0 1029 aaPredicted RBP15.29■□□□□ 0.04
UBXN1-213ENST00000532904 SEC14L6B5MCN3 397 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 TNFSF12O43508 249 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 IFNA5P01569 189 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 PCSK4Q6UW60 755 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 SPNS3Q6ZMD2 512 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.29■□□□□ 0.04
UBXN1-213ENST00000532904 MKXQ8IYA7 352 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 ZDHHC23Q8IYP9 409 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 NEK7Q8TDX7 302 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 GTF3AQ92664 365 aaKnown RBP15.29■□□□□ 0.04
UBXN1-213ENST00000532904 GPR146Q96CH1 333 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 RIMS4Q9H426 269 aaPredicted RBP15.29■□□□□ 0.04
UBXN1-213ENST00000532904 TREM2Q9NZC2 230 aa15.29■□□□□ 0.04
UBXN1-213ENST00000532904 TRBV6-6A0A0A6YYG2 114 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 TRAPPC2LH3BP13 241 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 CYB5BO43169 146 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 S100GP29377 79 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 NBL1P41271 181 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 P4HA3Q7Z4N8 544 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 RAB40CQ96S21 281 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 ZDHHC11Q9H8X9 412 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 CISD1Q9NZ45 108 aaKnown RBP15.28■□□□□ 0.04
UBXN1-213ENST00000532904 HSPB6O14558 160 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 CD200P41217 278 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 TNFSF10P50591 281 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 FAM90A2PQ658T7 463 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 ZNF324BQ6AW86 544 aaPredicted RBP15.28■□□□□ 0.04
UBXN1-213ENST00000532904 VASH2Q86V25 355 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 MRPL30Q8TCC3 161 aaKnown RBP15.28■□□□□ 0.04
UBXN1-213ENST00000532904 OPA3Q9H6K4 179 aa15.28■□□□□ 0.04
UBXN1-213ENST00000532904 NKX2-8O15522 239 aa15.27■□□□□ 0.03
UBXN1-213ENST00000532904 WNT2P09544 360 aa15.27■□□□□ 0.03
UBXN1-213ENST00000532904 PNRC1Q12796 327 aaPredicted RBP15.27■□□□□ 0.03
UBXN1-213ENST00000532904 IGFL2Q6UWQ7 119 aa15.27■□□□□ 0.03
UBXN1-213ENST00000532904 TUSC5Q8IXB3 177 aa15.27■□□□□ 0.03
UBXN1-213ENST00000532904 PRRG4Q9BZD6 226 aa15.27■□□□□ 0.03
UBXN1-213ENST00000532904 TMEM242Q9NWH2 141 aa15.27■□□□□ 0.03
UBXN1-213ENST00000532904 GNG13Q9P2W3 67 aa15.27■□□□□ 0.03
UBXN1-213ENST00000532904 OR2W1Q9Y3N9 320 aa15.27■□□□□ 0.03
UBXN1-213ENST00000532904 ELOA3CA0A087WX78 387 aaPredicted RBP15.26■□□□□ 0.03
UBXN1-213ENST00000532904 ATXN7O15265 892 aaPredicted RBP15.26■□□□□ 0.03
UBXN1-213ENST00000532904 IGHV3-9P01782 118 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 TRGC2P03986 189 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 RND2P52198 227 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 ARF1P84077 181 aaKnown RBP15.26■□□□□ 0.03
UBXN1-213ENST00000532904 TMEM267Q0VDI3 215 aaPredicted RBP15.26■□□□□ 0.03
UBXN1-213ENST00000532904 SLC25A24Q6NUK1 477 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 TMPRSS7Q7RTY8 843 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 MRPL21Q7Z2W9 205 aaKnown RBP15.26■□□□□ 0.03
UBXN1-213ENST00000532904 LINC00596Q86U02 117 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 MBD3L1Q8WWY6 194 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 GP6Q9HCN6 339 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 CNOT4O95628 575 aaKnown RBP15.26■□□□□ 0.03
UBXN1-213ENST00000532904 BCL2P10415 239 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 ZNF880Q6PDB4 577 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 C20orf204Q6ZNR8 217 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 HIST3H2BBQ8N257 126 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 PLK3Q9H4B4 646 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 RPRMQ9NS64 109 aa15.26■□□□□ 0.03
UBXN1-213ENST00000532904 TRGV5A0A0B4J1U4 118 aa15.25■□□□□ 0.03
UBXN1-213ENST00000532904 H3BP45 60 aa15.25■□□□□ 0.03
UBXN1-213ENST00000532904 SERPINE2P07093 398 aa15.25■□□□□ 0.03
UBXN1-213ENST00000532904 COX5BP10606 129 aa15.25■□□□□ 0.03
UBXN1-213ENST00000532904 CCNOP22674 350 aa15.25■□□□□ 0.03
UBXN1-213ENST00000532904 RAB11AP62491 216 aa15.25■□□□□ 0.03
UBXN1-213ENST00000532904 NKX6-1P78426 367 aaPredicted RBP15.25■□□□□ 0.03
UBXN1-213ENST00000532904 ZNF383Q8NA42 475 aa15.25■□□□□ 0.03
UBXN1-213ENST00000532904 OR5A2Q8NGI9 324 aa15.25■□□□□ 0.03
UBXN1-213ENST00000532904 APH1AQ96BI3 265 aa15.25■□□□□ 0.03
UBXN1-213ENST00000532904 WDYHV1Q96HA8 205 aa15.25■□□□□ 0.03
UBXN1-213ENST00000532904 FAM210BQ96KR6 192 aa15.25■□□□□ 0.03
UBXN1-213ENST00000532904 FREM1Q5H8C1 2179 aa15.25■□□□□ 0.03
UBXN1-213ENST00000532904 PPP1R2P9O14990 202 aa15.24■□□□□ 0.03
UBXN1-213ENST00000532904 TGOLN2O43493 480 aa15.24■□□□□ 0.03
UBXN1-213ENST00000532904 SYNGR1O43759 233 aa15.24■□□□□ 0.03
UBXN1-213ENST00000532904 SS18L1O75177 396 aaPredicted RBP15.24■□□□□ 0.03
UBXN1-213ENST00000532904 PSG2P11465 335 aa15.24■□□□□ 0.03
UBXN1-213ENST00000532904 ACSF3Q4G176 576 aaPredicted RBP15.24■□□□□ 0.03
UBXN1-213ENST00000532904 ZNF787Q6DD87 383 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms