RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 HBZP02008 142 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 CTXN2P0C2S0 81 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 NFYBP25208 207 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 SSTR5P35346 364 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 HLA-DRB3P79483 266 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 HMGN3Q15651 99 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 OLFML2AQ68BL7 652 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 Q6ZS49 121 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 IZUMO1Q8IYV9 350 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 LINC00528Q8N1L1 170 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 C11orf42Q8N5U0 333 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 SIGLECL1Q8N7X8 197 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 OR4A4PQ8NGN8 299 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 SGMS2Q8NHU3 365 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 RFESDQ8TAC1 157 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 ZNF596Q8TC21 504 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 CREB3L1Q96BA8 519 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 MIXL1Q9H2W2 232 aa16.45■□□□□ 0.22
USP53-208ENST00000514305 TRAV39A0A0B4J263 110 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 TRAV40A0A0B4J280 105 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 C15orf65H3BRN8 121 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 F2RL2O00254 374 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 SDCBPO00560 298 aaPredicted RBP16.44■□□□□ 0.22
USP53-208ENST00000514305 LPLP06858 475 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 IL18Q14116 193 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 AWAT1Q58HT5 328 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 SPANXN2Q5MJ10 180 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 PRAMEF5Q5TYX0 476 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 ZNF782Q6ZMW2 699 aaPredicted RBP16.44■□□□□ 0.22
USP53-208ENST00000514305 NUDCD2Q8WVJ2 157 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 TNFRSF14Q92956 283 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 KIRREL1Q96J84 757 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 HDHD3Q9BSH5 251 aaPredicted RBP16.44■□□□□ 0.22
USP53-208ENST00000514305 ST6GALNAC5Q9BVH7 336 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 CLEC7AQ9BXN2 247 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 MS4A7Q9GZW8 240 aaPredicted RBP16.44■□□□□ 0.22
USP53-208ENST00000514305 GNG12Q9UBI6 72 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 ZNF69Q9UC07 566 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 JPT1Q9UK76 154 aa16.44■□□□□ 0.22
USP53-208ENST00000514305 HSPA12AO43301 675 aa16.43■□□□□ 0.22
USP53-208ENST00000514305 HLA-DQB1P01920 261 aa16.43■□□□□ 0.22
USP53-208ENST00000514305 OMGP23515 440 aa16.43■□□□□ 0.22
USP53-208ENST00000514305 PTBP1P26599 531 aaKnown RBP eCLIP16.43■□□□□ 0.22
USP53-208ENST00000514305 TNFSF8P32971 234 aa16.43■□□□□ 0.22
USP53-208ENST00000514305 FOXL1Q12952 345 aa16.43■□□□□ 0.22
USP53-208ENST00000514305 CNPY1Q3B7I2 92 aa16.43■□□□□ 0.22
USP53-208ENST00000514305 LINC00299Q6ZSB3 139 aa16.43■□□□□ 0.22
USP53-208ENST00000514305 SNX29P2Q8IUI4 249 aa16.43■□□□□ 0.22
USP53-208ENST00000514305 ABHD12Q8N2K0 398 aa16.43■□□□□ 0.22
USP53-208ENST00000514305 OR2S2Q9NQN1 319 aa16.43■□□□□ 0.22
USP53-208ENST00000514305 A0A087X0M5 115 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 IGHV1-69DA0A0B4J2H0 117 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 CENPVL3A0A0U1RRI6 287 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 A0A1B0GX30 115 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 FABP7O15540 132 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 IGHV1-69P01742 117 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 ZBTB25P24278 435 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 CD34P28906 385 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 LTC4SQ16873 150 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 MIDNQ504T8 468 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 KLF17Q5JT82 389 aaPredicted RBP16.42■□□□□ 0.22
USP53-208ENST00000514305 FAM131AQ6UXB0 335 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 PNKDQ8N490 385 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 DTX3Q8N9I9 347 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 OR11H6Q8NGC7 330 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 OR9G1Q8NH87 305 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 FCAMRQ8WWV6 532 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 IL1F10Q8WWZ1 152 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 GFOD1Q9NXC2 390 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 PTTG2Q9NZH5 202 aa16.42■□□□□ 0.22
USP53-208ENST00000514305 AMMECR1Q9Y4X0 333 aaPredicted RBP16.42■□□□□ 0.22
USP53-208ENST00000514305 IGHV2-26A0A0B4J1V2 119 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 DNAJC9-AS1A6NH13 148 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 RBBP9O75884 186 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 COX7A1P24310 79 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 ARPC4P59998 168 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 ACTBP60709 375 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 BAMBIQ13145 260 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 HOGA1Q86XE5 327 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 BEST4Q8NFU0 473 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 OR6Q1Q8NGQ2 317 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 OR1L1Q8NH94 360 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 EDARADDQ8WWZ3 215 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 DUX5Q96PT3 197 aa16.41■□□□□ 0.22
USP53-208ENST00000514305 TBL2Q9Y4P3 447 aaKnown RBP16.41■□□□□ 0.22
USP53-208ENST00000514305 RNASEK-C17orf49H0YIS7 233 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 GABARAPH6UMI1 98 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 CTDSPLO15194 276 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 YPEL1O60688 119 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 ARG1P05089 322 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 HKR1P10072 659 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 IL3RAP26951 378 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 CEACAM3P40198 252 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 SSBP1Q04837 148 aaKnown RBP16.4■□□□□ 0.22
USP53-208ENST00000514305 LY6G6FQ5SQ64 297 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 MINOS1Q5TGZ0 78 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 BCL6BQ8N143 479 aaPredicted RBP16.4■□□□□ 0.22
USP53-208ENST00000514305 C8orf31Q8N9H6 132 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 BEND2Q8NDZ0 799 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 OR10J5Q8NHC4 309 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms