RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 SLC39A9Q9NUM3 307 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 RCL1Q9Y2P8 373 aaKnown RBP4.34□□□□□ -1.71
PHF3-210ENST00000509876 LSM2Q9Y333 95 aaKnown RBP4.34□□□□□ -1.71
PHF3-210ENST00000509876 LYNX1G3V0Z9 82 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 GNG7O60262 68 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 MBP02144 154 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 ACAA1P09110 424 aaPredicted RBP4.34□□□□□ -1.71
PHF3-210ENST00000509876 LYNX1P0DP58 116 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 HOXD11P31277 338 aaPredicted RBP4.34□□□□□ -1.71
PHF3-210ENST00000509876 VDAC2P45880 294 aaPredicted RBP4.34□□□□□ -1.71
PHF3-210ENST00000509876 GLIPR1P48060 266 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 TDGF1P3P51864 188 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 PAFAH1B2P68402 229 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 WDR82Q6UXN9 313 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 SMIM15Q7Z3B0 74 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 ZNF843Q8N446 348 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.34□□□□□ -1.71
PHF3-210ENST00000509876 OR10A7Q8NGE5 316 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 FGFBP3Q8TAT2 258 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 DMRTA2Q96SC8 542 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 CCL28Q9NRJ3 127 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 NPAP1Q9NZP6 1156 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 OPN4Q9UHM6 478 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 SCN2AQ99250 2005 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 RP1P56715 2156 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 A0A0U1RQK1 487 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 A0A1B0GV50 99 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 ZNF320A2RRD8 509 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 SNRPGP15A8MWD9 76 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 RNF223E7ERA6 249 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 HBE1P02100 147 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 S100PP25815 95 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 RHEBQ15382 184 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 FAM201AQ5SY85 155 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 UNQ5815/PRO19632Q6UWF5 114 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 TMEM91Q6ZNR0 172 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 LRP11Q86VZ4 500 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 FAM219AQ8IW50 185 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 MMD2Q8IY49 270 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 OR1L1Q8NH94 360 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 PGLYRP3Q96LB9 341 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 PLEKHA2Q9HB19 425 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 OR51B2Q9Y5P1 312 aa4.34□□□□□ -1.71
PHF3-210ENST00000509876 POM121CA8CG34 1229 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 TMEM178BH3BS89 294 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 PSG2P11465 335 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 ZNF250P15622 560 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 F2RP25116 425 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 NPBWR1P48145 328 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 ADIPOQQ15848 244 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 HIST3H3Q16695 136 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 TMEM155Q4W5P6 130 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 IL34Q6ZMJ4 242 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 FOXL2NBQ6ZUU3 175 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 RAB40CQ96S21 281 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 SIRT4Q9Y6E7 314 aaPredicted RBP4.34□□□□□ -1.72
PHF3-210ENST00000509876 LALBAP00709 142 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 OR2B8PP59922 312 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 CST9LP1Q5W188 147 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 GVQW1Q8N7I0 195 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 FBLIM1Q8WUP2 373 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 RBPMSQ93062 196 aaKnown RBP4.34□□□□□ -1.72
PHF3-210ENST00000509876 ITPKCQ96DU7 683 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 PRSS22Q9GZN4 317 aa4.34□□□□□ -1.72
PHF3-210ENST00000509876 FAM212BQ9NTI7 297 aaPredicted RBP4.34□□□□□ -1.72
PHF3-210ENST00000509876 PLXNB3Q9ULL4 1909 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 KBTBD11-OT1A0A1B0GTJ5 212 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 OR5H14A6NHG9 310 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 CCSO14618 274 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 TAAR5O14804 337 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 RHBDL1O75783 438 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 CCL1P22362 96 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 EFNB3Q15768 340 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 Q9N2K0 584 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 CACNG5Q9UF02 275 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 CEACAM18A8MTB9 384 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 NUPL2O15504 423 aaKnown RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 OR2F2O95006 317 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 SPDEFO95238 335 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 NPBWR2P48146 333 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 CALHM1Q8IU99 346 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 LYSMD2Q8IV50 215 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 BPIFCQ8NFQ6 507 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 LPAR5Q9H1C0 372 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 IGHV3-72A0A0B4J1Y9 119 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 OPN1MWP04001 364 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 TRAPPC2P0DI81 140 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 TRAPPC2BP0DI82 140 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 OPN1MW2P0DN77 364 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 OPN1MW3P0DN78 364 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 RPL27AP46776 148 aaKnown RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 LOXL3P58215 753 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 ADORA2A-AS1P86434 159 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 ATP5G2Q06055 141 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 COLCA1Q6ZS62 124 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 ZCCHC24Q8N2G6 241 aaKnown RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 ZNF525Q8N782 197 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.33□□□□□ -1.72
PHF3-210ENST00000509876 OR4F17Q8NGA8 305 aa4.33□□□□□ -1.72
PHF3-210ENST00000509876 OR4F5Q8NH21 305 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms