RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 NBEAQ8NFP9 2946 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 A0A1B0GW64 132 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 FAM24AA6NFZ4 105 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 OOEPA6NGQ2 149 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 IFNL4K9M1U5 179 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 TIMM8AO60220 97 aaPredicted RBP10.13□□□□□ -0.79
NUP54-202ENST00000502850 WDR1O75083 606 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 IGLV1-44P01699 117 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 HEXAP06865 529 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 GRPP07492 148 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 CD80P33681 288 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 SNCAP37840 140 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 RAB2AP61019 212 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 NHLH2Q02577 135 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 GUCA2BQ16661 112 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 SMIM21Q3B7S5 101 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 MBNL2Q5VZF2 373 aaKnown RBP10.13□□□□□ -0.79
NUP54-202ENST00000502850 BEND4Q6ZU67 534 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 TCTEX1D1Q8N7M0 179 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 WDR31Q8NA23 367 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 HSD17B11Q8NBQ5 300 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 PLPPR1Q8TBJ4 325 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 FAM216AQ8WUB2 273 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 TMEM231Q9H6L2 316 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 KCNS2Q9ULS6 477 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 WSB1Q9Y6I7 421 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 DOCK7Q96N67 2140 aa10.13□□□□□ -0.79
NUP54-202ENST00000502850 A0A1W2PR80 420 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 IGSF23A1L1A6 192 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 FAM74A7A6NL05 159 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 FAM90A26D6RGX4 464 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 NUPL2O15504 423 aaKnown RBP10.12□□□□□ -0.79
NUP54-202ENST00000502850 TNFSF12O43508 249 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 OR8U9P0C7N5 309 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 ERVS71-1P61550 626 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 SRSF3P84103 164 aaKnown RBP10.12□□□□□ -0.79
NUP54-202ENST00000502850 FLI1Q01543 452 aaPredicted RBP10.12□□□□□ -0.79
NUP54-202ENST00000502850 TESK1Q15569 626 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 GUK1Q16774 197 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 DEFB109BQ30KR1 87 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 FAM74A3Q4VXF1 159 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 OR8U1Q8NH10 309 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 OR51H1Q8NH63 302 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 GALMQ96C23 342 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 BSCL2Q96G97 398 aaPredicted RBP10.12□□□□□ -0.79
NUP54-202ENST00000502850 ATP5SQ99766 215 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 OR1A1Q9P1Q5 309 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 FAM96BQ9Y3D0 163 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 ZFHX4Q86UP3 3567 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 PTPRQQ9UMZ3 2332 aa10.12□□□□□ -0.79
NUP54-202ENST00000502850 MBD3L4A6NDZ8 208 aaPredicted RBP10.11□□□□□ -0.79
NUP54-202ENST00000502850 MBD3L3A6NE82 208 aaPredicted RBP10.11□□□□□ -0.79
NUP54-202ENST00000502850 MBD3L5A6NJ08 208 aaPredicted RBP10.11□□□□□ -0.79
NUP54-202ENST00000502850 H7C2Y5 167 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 K7N7A8 449 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 H2AFB1P0C5Y9 115 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 CECR9P0C854 216 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 PSG2P11465 335 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 MPV17P39210 176 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 SULT1A1P50225 295 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 TAS2R30P59541 319 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 CATR1Q13166 79 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 C3orf36Q3SXR2 165 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 CXorf66Q5JRM2 361 aaPredicted RBP10.11□□□□□ -0.79
NUP54-202ENST00000502850 VWA1Q6PCB0 445 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 IGFL3Q6UXB1 125 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 BHLHA15Q7RTS1 189 aaPredicted RBP10.11□□□□□ -0.79
NUP54-202ENST00000502850 SPACA3Q8IXA5 215 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 ZNF645Q8N7E2 425 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 OR5C1Q8NGR4 320 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 OR2G3Q8NGZ4 309 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 MBD3L2Q8NHZ7 208 aaPredicted RBP10.11□□□□□ -0.79
NUP54-202ENST00000502850 NINJ1Q92982 152 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 TOLLIPQ9H0E2 274 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 PRORYQ9H606 182 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 UNKLQ9H9P5 680 aaKnown RBP10.11□□□□□ -0.79
NUP54-202ENST00000502850 COA4Q9NYJ1 87 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 TINAGQ9UJW2 476 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 RNF115Q9Y4L5 304 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 ITPR1Q14643 2758 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 A0A1B0GWJ7 208 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 OR5H1A6NKK0 313 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 A6NLC8 198 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 AGPAT2O15120 278 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 SIGLEC5O15389 551 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 MLNRO43193 412 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 CHST1O43916 411 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 IFNA5P01569 189 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 HBE1P02100 147 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 CTRB1P17538 263 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 ATP6V0CP27449 155 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 IL2RGP31785 369 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 CEACAM6P40199 344 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 ARHGDIBP52566 201 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 PAX5Q02548 391 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 CLINT1Q14677 625 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 CTRB2Q6GPI1 263 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 CLEC9AQ6UXN8 241 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 ACP7Q6ZNF0 438 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 TMEM182Q6ZP80 229 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms