RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 RAB40CQ96S21 281 aa8.8□□□□□ -1
SREBF2-208ENST00000491541 TMEM208Q9BTX3 173 aa8.8□□□□□ -1
SREBF2-208ENST00000491541 ZNF581Q9P0T4 197 aa8.8□□□□□ -1
SREBF2-208ENST00000491541 SPTBN1Q01082 2364 aaKnown RBP8.79□□□□□ -1
SREBF2-208ENST00000491541 BRS3P32247 399 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 CAPZBP47756 277 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 OR3A1P47881 315 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 HERV-K104P61576 105 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 RANP62826 216 aaKnown RBP8.79□□□□□ -1
SREBF2-208ENST00000491541 TMEM41BQ5BJD5 291 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 PCSK4Q6UW60 755 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 PNKDQ8N490 385 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 CCDC71LQ8N9Z2 235 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 SPIN2AQ99865 258 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 SPIN2BQ9BPZ2 258 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 HDHD3Q9BSH5 251 aaPredicted RBP8.79□□□□□ -1
SREBF2-208ENST00000491541 NPFFR1Q9GZQ6 430 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 FAM60AQ9NP50 221 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 MED29Q9NX70 200 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 VSTM2BA6NLU5 285 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 APOBEC3AP31941 199 aaPredicted RBP8.79□□□□□ -1
SREBF2-208ENST00000491541 ZNF41P51814 821 aaPredicted RBP8.79□□□□□ -1
SREBF2-208ENST00000491541 POU3F1Q03052 451 aaPredicted RBP8.79□□□□□ -1
SREBF2-208ENST00000491541 ZNF774Q6NX45 483 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 LHFPL2Q6ZUX7 228 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 OR5C1Q8NGR4 320 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 MIEN1Q9BRT3 115 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 NXF5Q9H1B4 397 aaKnown RBP8.79□□□□□ -1
SREBF2-208ENST00000491541 ROS1P08922 2347 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 SDK2Q58EX2 2172 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 IGKV1-27A0A075B6S5 117 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 H7BYZ3 331 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 MPPED1O15442 326 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 VDAC1P21796 283 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 PDCD1Q15116 288 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 NSDHLQ15738 373 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 RASL11AQ6T310 242 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 C6orf201Q7Z4U5 140 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 IFI44Q8TCB0 444 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 SPACA9Q96E40 222 aaPredicted RBP8.79□□□□□ -1
SREBF2-208ENST00000491541 GAL3ST2Q9H3Q3 398 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 RBKSQ9H477 322 aa8.79□□□□□ -1
SREBF2-208ENST00000491541 PATZ1Q9HBE1 687 aaKnown RBP8.79□□□□□ -1
SREBF2-208ENST00000491541 SIAH2O43255 324 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 TRAPPC6AO75865 159 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 RRADP55042 308 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 COL10A1Q03692 680 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 BRICD5Q6PL45 260 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 FAM57BQ71RH2 274 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 PATE1Q8WXA2 126 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 CCDC74BQ96LY2 380 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 MED12Q93074 2177 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 IFNA5P01569 189 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 ARSJQ5FYB0 599 aaPredicted RBP8.78□□□□□ -1
SREBF2-208ENST00000491541 SDSLQ96GA7 329 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 SMIM7Q9BQ49 75 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 PARD6AQ9NPB6 346 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 FKBP11Q9NYL4 201 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 MYOTQ9UBF9 498 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 PAM16Q9Y3D7 125 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 H3BML4 177 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 AQP7O14520 342 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 HMGB3O15347 200 aaKnown RBP8.78□□□□□ -1
SREBF2-208ENST00000491541 UMODP07911 640 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 TFPI2P48307 235 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 P2RY6Q15077 328 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 ATP6V1FQ16864 119 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 C1QL2Q7Z5L3 287 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 ZNF695Q8IW36 515 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 BATF2Q8N1L9 274 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 OR2D3Q8NGH3 330 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 SCGB1C1Q8TD33 95 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 TMEM234Q8WY98 164 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 MBD6Q96DN6 1003 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 TP53RKQ96S44 253 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 RIMS4Q9H426 269 aaPredicted RBP8.78□□□□□ -1
SREBF2-208ENST00000491541 SLC45A2Q9UMX9 530 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 ZFP30Q9Y2G7 519 aa8.78□□□□□ -1
SREBF2-208ENST00000491541 C9JCJ5 164 aa8.77□□□□□ -1
SREBF2-208ENST00000491541 DRD1P21728 446 aa8.77□□□□□ -1
SREBF2-208ENST00000491541 NKX2-1P43699 371 aaPredicted RBP8.77□□□□□ -1
SREBF2-208ENST00000491541 LHX2P50458 406 aa8.77□□□□□ -1
SREBF2-208ENST00000491541 ZNF324BQ6AW86 544 aaPredicted RBP8.77□□□□□ -1
SREBF2-208ENST00000491541 SSX7Q7RTT5 188 aa8.77□□□□□ -1
SREBF2-208ENST00000491541 SPRED2Q7Z698 418 aa8.77□□□□□ -1
SREBF2-208ENST00000491541 OXGR1Q96P68 337 aa8.77□□□□□ -1
SREBF2-208ENST00000491541 METTL7AQ9H8H3 244 aa8.77□□□□□ -1
SREBF2-208ENST00000491541 TTC28Q96AY4 2481 aa8.77□□□□□ -1
SREBF2-208ENST00000491541 C2orf72A6NCS6 295 aa8.77□□□□□ -1.01
SREBF2-208ENST00000491541 CBY3A6NI87 242 aa8.77□□□□□ -1.01
SREBF2-208ENST00000491541 F6UZH7 168 aa8.77□□□□□ -1.01
SREBF2-208ENST00000491541 FGF5P12034 268 aa8.77□□□□□ -1.01
SREBF2-208ENST00000491541 FCGR2AP12318 317 aa8.77□□□□□ -1.01
SREBF2-208ENST00000491541 RPL23P62829 140 aaKnown RBP8.77□□□□□ -1.01
SREBF2-208ENST00000491541 GTF3C1Q12789 2109 aa8.77□□□□□ -1.01
SREBF2-208ENST00000491541 FAM27BQ5VT28 67 aa8.77□□□□□ -1.01
SREBF2-208ENST00000491541 PARM1Q6UWI2 310 aa8.77□□□□□ -1.01
SREBF2-208ENST00000491541 SF3B5Q9BWJ5 86 aaKnown RBP8.77□□□□□ -1.01
SREBF2-208ENST00000491541 A0A1W2PR80 420 aa8.77□□□□□ -1.01
SREBF2-208ENST00000491541 CTXN2P0C2S0 81 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms