RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 RNPS1Q15287 305 aaKnown RBP16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 R3HDM4Q96D70 268 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 OCIAD1Q9NX40 245 aa16.54■□□□□ 0.24
SNAPC3-206ENST00000490969 KIAA1324LA8MWY0 1029 aaPredicted RBP16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 RAB4AP20338 218 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 GNB2P62879 340 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 SERF2P84101 59 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 MEF2BQ02080 365 aaPredicted RBP16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 TMEM41BQ5BJD5 291 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 CARFQ8N187 725 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 ZNF525Q8N782 197 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 GPR146Q96CH1 333 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 RPUSD4Q96CM3 377 aaKnown RBP16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 ULBP2Q9BZM5 246 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 ARRDC1-AS1Q9H2J1 176 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 LRRC3CA6NJW4 275 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 NPIPA2E9PIF3 369 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 NPIPA3F8WFD2 350 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 SOX15O60248 233 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 CNOT4O95628 575 aaKnown RBP16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 ARL16Q0P5N6 197 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 RTP5Q14D33 572 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 HERPUD1Q15011 391 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 ACOT6Q3I5F7 207 aaPredicted RBP16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 FAM27BQ5VT28 67 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 ZNF774Q6NX45 483 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 SLC23A3Q6PIS1 610 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 PLK3Q9H4B4 646 aa16.53■□□□□ 0.24
SNAPC3-206ENST00000490969 SYNGR3O43761 229 aa16.52■□□□□ 0.24
SNAPC3-206ENST00000490969 TUSC2O75896 110 aa16.52■□□□□ 0.24
SNAPC3-206ENST00000490969 PLCXD3Q63HM9 321 aa16.52■□□□□ 0.24
SNAPC3-206ENST00000490969 THOC3Q96J01 351 aaKnown RBP16.52■□□□□ 0.24
SNAPC3-206ENST00000490969 MYOTQ9UBF9 498 aa16.52■□□□□ 0.24
SNAPC3-206ENST00000490969 PGLYRP1O75594 196 aaPredicted RBP16.52■□□□□ 0.23
SNAPC3-206ENST00000490969 C1orf194Q5T5A4 169 aa16.52■□□□□ 0.23
SNAPC3-206ENST00000490969 KMT5CQ86Y97 462 aa16.52■□□□□ 0.23
SNAPC3-206ENST00000490969 CALHM1Q8IU99 346 aa16.52■□□□□ 0.23
SNAPC3-206ENST00000490969 OR1F12Q8NHA8 337 aa16.52■□□□□ 0.23
SNAPC3-206ENST00000490969 OR51I2Q9H344 312 aa16.52■□□□□ 0.23
SNAPC3-206ENST00000490969 TMEM210A6NLX4 147 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 SCGB1D1O95968 90 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 FKBP2P26885 142 aaKnown RBP16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 ELLP55199 621 aaPredicted RBP16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 PRSS8Q16651 343 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 IZUMO4Q1ZYL8 232 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 LRRC75BQ2VPJ9 315 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 GBGT1Q8N5D6 347 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 LHX4Q969G2 390 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 UCN2Q96RP3 112 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 FKBP11Q9NYL4 201 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 R4GN57 208 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 KIR2DL5BA0A0G2JN68 375 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 KIR2DL5BA0A0G2JPC4 375 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 MARCH11A6NNE9 402 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 KIR2DL5AQ8N109 375 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 ZNF611Q8N823 705 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 PIGCQ92535 297 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 PINX1Q96BK5 328 aaKnown RBP16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 OR6C3Q9NZP0 311 aa16.51■□□□□ 0.23
SNAPC3-206ENST00000490969 MBP02144 154 aa16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 F2RP25116 425 aa16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 TLE1Q04724 770 aa16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 HAPLN4Q86UW8 402 aa16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 FADS6Q8N9I5 356 aa16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 OR2T10Q8NGZ9 312 aa16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 POLR3KQ9Y2Y1 108 aaPredicted RBP16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 IFNL4K9M1U5 179 aa16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 GGCTO75223 188 aaKnown RBP16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 NAPSAO96009 420 aa16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 IAPPP10997 89 aa16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 SLC25A6P12236 298 aa16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 WFIKKN1Q96NZ8 548 aa16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 PARLQ9H300 379 aa16.5■□□□□ 0.23
SNAPC3-206ENST00000490969 hCG_38984A0A1B0GV85 526 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 TYMSP04818 313 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 MPLP40238 635 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 SRSF7Q16629 238 aaKnown RBP eCLIP16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 RHBDD2Q6NTF9 364 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 CISD2Q8N5K1 135 aaKnown RBP16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 SLC39A9Q9NUM3 307 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 PSENENQ9NZ42 101 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 IGKV1-6A0A0C4DH72 117 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 TMEM250H0YL14 139 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 CST2P09228 141 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 CNN1P51911 297 aaKnown RBP16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 DCAF10Q5QP82 559 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 PRAMEF20Q5VT98 475 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 Q6ZRM9 215 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 MRPL30Q8TCC3 161 aaKnown RBP16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 ANAPC16Q96DE5 110 aa16.49■□□□□ 0.23
SNAPC3-206ENST00000490969 EP300Q09472 2414 aaPredicted RBP16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 TOX3O15405 576 aaPredicted RBP16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 SYNGR2O43760 224 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 SCRG1O75711 98 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 ZFAND5O76080 213 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 CER1O95813 267 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 HBG1P69891 147 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 HBG2P69892 147 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 ZNF92Q03936 586 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 WDR61Q9GZS3 305 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms