RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 HLA-DRB3P79483 266 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 HTD2P86397 168 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 KIR2DS1Q14954 304 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 MINOS1Q5TGZ0 78 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 STEAP3Q658P3 488 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 BEND2Q8NDZ0 799 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 OR52L2PQ8NGH6 319 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 MALSU1Q96EH3 234 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 ZNF230Q9UIE0 474 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-219ENST00000488186 ELF5Q9UKW6 265 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-219ENST00000488186 MINOS1-NBL1R4GNA1 71 aa12.79□□□□□ -0.36
C9orf3-219ENST00000488186 LEUTXA8MZ59 168 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 ZNF701M0R085 212 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-219ENST00000488186 ELK1P19419 428 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 DTYMKP23919 212 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 ARHGDIBP52566 201 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 SSX2Q16385 188 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 Q6YL49 198 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 LHFPL4Q7Z7J7 247 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 NUDCD2Q8WVJ2 157 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 MAFIPQ8WZ33 124 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 DGCR14Q96DF8 476 aaKnown RBP12.78□□□□□ -0.36
C9orf3-219ENST00000488186 ZNF48Q96MX3 618 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-219ENST00000488186 DCUN1D5Q9BTE7 237 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 C6orf62Q9GZU0 229 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-219ENST00000488186 MMP28Q9H239 520 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 DPAGT1Q9H3H5 408 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 AUNIPQ9H7T9 357 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 ABCB10Q9NRK6 738 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 TNFRSF19Q9NS68 423 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 DPM3Q9P2X0 92 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 JPT1Q9UK76 154 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 HILPDAQ9Y5L2 63 aa12.78□□□□□ -0.36
C9orf3-219ENST00000488186 A0A1W2PPE3 182 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 HOXA3O43365 443 aaPredicted RBP12.77□□□□□ -0.37
C9orf3-219ENST00000488186 SCTP09683 121 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 ZBTB25P24278 435 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 IL3RAP26951 378 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 CBX5P45973 191 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 LOXL3P58215 753 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 TAS2R20P59543 309 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 HILS1P60008 231 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 HLA-DRB5Q30154 266 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 Q3ZCU0 254 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 C5orf24Q7Z6I8 188 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 OR4P4Q8NGL7 312 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 OR4A4PQ8NGN8 299 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 MCFD2Q8NI22 146 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 ZFAND2BQ8WV99 257 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 C17orf50Q8WW18 174 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 SSMEM1Q8WWF3 244 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 RBM38Q9H0Z9 239 aaKnown RBP12.77□□□□□ -0.37
C9orf3-219ENST00000488186 SLC23A1Q9UHI7 598 aa12.77□□□□□ -0.37
C9orf3-219ENST00000488186 DPPA5A6NC42 116 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 BUB1B-PAK6H3BSN5 160 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 TRIM77I1YAP6 450 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 BET1O15155 118 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 FABP7O15540 132 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 IGLV1-47P01700 117 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 LPLP06858 475 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 MELTFP08582 738 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 PRSS3P35030 304 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 PPP1CCP36873 323 aaKnown RBP12.76□□□□□ -0.37
C9orf3-219ENST00000488186 CEACAM6P40199 344 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 MADCAM1Q13477 382 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 SRSF7Q16629 238 aaKnown RBP eCLIP12.76□□□□□ -0.37
C9orf3-219ENST00000488186 MORN2Q502X0 79 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 PLA1AQ53H76 456 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 OR2AK2Q8NG84 335 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 OR10J5Q8NHC4 309 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 RPEQ96AT9 228 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 DUX5Q96PT3 197 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 MEGF9Q9H1U4 602 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 PRDM13Q9H4Q3 707 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 IFT46Q9NQC8 304 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 EXTL2Q9UBQ6 330 aa12.76□□□□□ -0.37
C9orf3-219ENST00000488186 CTDSP2O14595 271 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 YPEL1O60688 119 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 VENTXO95231 258 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 GSTT2P0CG29 244 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 GSTT2BP0CG30 244 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 GNMTQ14749 295 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 LRRC75BQ2VPJ9 315 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 UTF1Q5T230 341 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 CCDC144NLQ6NUI1 221 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 Q6ZPA2 131 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 LDLRAD3Q86YD5 345 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 C8orf31Q8N9H6 132 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 C15orf40Q8WUR7 153 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 TOMM40LQ969M1 308 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 YPEL2Q96QA6 119 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 SSX3Q99909 188 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 OCSTAMPQ9BR26 566 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 GINS4Q9BRT9 223 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 ZNRD1Q9P1U0 126 aa12.75□□□□□ -0.37
C9orf3-219ENST00000488186 FBN1P35555 2871 aaKnown RBP12.74□□□□□ -0.37
C9orf3-219ENST00000488186 DNAJC9-AS1A6NH13 148 aa12.74□□□□□ -0.37
C9orf3-219ENST00000488186 SSX5O60225 188 aa12.74□□□□□ -0.37
C9orf3-219ENST00000488186 IGHV4-59P01825 116 aa12.74□□□□□ -0.37
C9orf3-219ENST00000488186 CTXN2P0C2S0 81 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms