RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PVALBP20472 110 aaPredicted RBP6.66□□□□□ -1.34
VMA21-203ENST00000477649 SSTR2P30874 369 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 GABRA2P47869 451 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 OR3A1P47881 315 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 COL10A1Q03692 680 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 BSPH1Q075Z2 132 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 EXOSC2Q13868 293 aaKnown RBP6.66□□□□□ -1.34
VMA21-203ENST00000477649 ATXN7L3Q14CW9 347 aaPredicted RBP6.66□□□□□ -1.34
VMA21-203ENST00000477649 ADIPOQQ15848 244 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 MSMPQ1L6U9 139 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 LRRC37A5PQ49AS3 106 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 PRR30Q53SZ7 412 aaPredicted RBP6.66□□□□□ -1.34
VMA21-203ENST00000477649 BEX5Q5H9J7 111 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 GPR157Q5UAW9 335 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 TEX36Q5VZQ5 186 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 THOC7Q6I9Y2 204 aaKnown RBP6.66□□□□□ -1.34
VMA21-203ENST00000477649 ALKBH2Q6NS38 261 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 C20orf204Q6ZNR8 217 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 ZNF826PQ6ZT77 177 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 MOGAT3Q86VF5 341 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 LRP11Q86VZ4 500 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 GCSAMQ8N6F7 178 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 STOML3Q8TAV4 291 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 ITLN1Q8WWA0 313 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 DCUN1D4Q92564 292 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 LSM10Q969L4 123 aaKnown RBP6.66□□□□□ -1.34
VMA21-203ENST00000477649 RNF126Q9BV68 326 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 SHARPINQ9H0F6 387 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 SLC25A32Q9H2D1 315 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 MBD2Q9UBB5 411 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 LPAR3Q9UBY5 353 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 CACFD1Q9UGQ2 172 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 ERRFI1Q9UJM3 462 aaPredicted RBP6.66□□□□□ -1.34
VMA21-203ENST00000477649 JPT1Q9UK76 154 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 LAMP3Q9UQV4 416 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 NSG2Q9Y328 171 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 RBM7Q9Y580 266 aaKnown RBP6.66□□□□□ -1.34
VMA21-203ENST00000477649 CEP295Q9C0D2 2601 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 ACACAQ13085 2346 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 ATRXP46100 2492 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 TRAV38-1A0A0B4J264 116 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 A0A1B0GU03 582 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 NKX6-3A6NJ46 265 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 B9A039 149 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 WNT9BO14905 357 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 NDUFA2O43678 99 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 DEDDO75618 318 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 LY86O95711 162 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 HBZP02008 142 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 SERPINE2P07093 398 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 TPT1P13693 172 aaKnown RBP6.65□□□□□ -1.34
VMA21-203ENST00000477649 AGAP20933 346 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 APOBEC3AP31941 199 aaPredicted RBP6.65□□□□□ -1.34
VMA21-203ENST00000477649 CEACAM6P40199 344 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 P2RY1P47900 373 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 P2RX3P56373 397 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 CATR1Q13166 79 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 GNMTQ14749 295 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 TMEM268Q5VZI3 342 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 ZNF66Q6ZN08 573 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 ZNF818PQ6ZRF7 136 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 FAM219AQ8IW50 185 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 OR8H3Q8N146 312 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 ZNF808Q8N4W9 903 aaPredicted RBP6.65□□□□□ -1.34
VMA21-203ENST00000477649 CD177Q8N6Q3 437 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 ZNF645Q8N7E2 425 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 KDF1Q8NAX2 398 aaPredicted RBP6.65□□□□□ -1.34
VMA21-203ENST00000477649 OR10A7Q8NGE5 316 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 ANGPTL6Q8NI99 470 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 CD300LFQ8TDQ1 290 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 IL1F10Q8WWZ1 152 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 COQ2Q96H96 371 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 CYYR1Q96J86 154 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 OR10C1Q96KK4 312 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 WFIKKN1Q96NZ8 548 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 ZNF665Q9H7R5 613 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 GCM1Q9NP62 436 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 CCL28Q9NRJ3 127 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 GSKIPQ9P0R6 139 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 SH3BGRL2Q9UJC5 107 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 GAB2Q9UQC2 676 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 PPP1R3CQ9UQK1 317 aa6.65□□□□□ -1.34
VMA21-203ENST00000477649 CELSR3Q9NYQ7 3312 aa6.65□□□□□ -1.35
VMA21-203ENST00000477649 AKAP13Q12802 2813 aa6.65□□□□□ -1.35
VMA21-203ENST00000477649 DMXL2Q8TDJ6 3036 aa6.65□□□□□ -1.35
VMA21-203ENST00000477649 IGKV1D-17A0A075B6S4 117 aa6.64□□□□□ -1.35
VMA21-203ENST00000477649 IGKV1D-13A0A0B4J2D9 117 aa6.64□□□□□ -1.35
VMA21-203ENST00000477649 ODAMA1E959 279 aa6.64□□□□□ -1.35
VMA21-203ENST00000477649 C12orf77C9JDV5 145 aa6.64□□□□□ -1.35
VMA21-203ENST00000477649 F5H0A9 414 aaPredicted RBP6.64□□□□□ -1.35
VMA21-203ENST00000477649 K7EPK0 472 aa6.64□□□□□ -1.35
VMA21-203ENST00000477649 LGALS8O00214 317 aa6.64□□□□□ -1.35
VMA21-203ENST00000477649 HSD17B6O14756 317 aa6.64□□□□□ -1.35
VMA21-203ENST00000477649 YPEL1O60688 119 aa6.64□□□□□ -1.35
VMA21-203ENST00000477649 JTBO76095 146 aa6.64□□□□□ -1.35
VMA21-203ENST00000477649 GAPDHP04406 335 aaKnown RBP6.64□□□□□ -1.35
VMA21-203ENST00000477649 IGKV1-13P0DP09 117 aa6.64□□□□□ -1.35
VMA21-203ENST00000477649 RAB7AP51149 207 aa6.64□□□□□ -1.35
VMA21-203ENST00000477649 ARHGDIBP52566 201 aa6.64□□□□□ -1.35
VMA21-203ENST00000477649 S100A10P60903 97 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms