RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SOSTQ9BQB4 213 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 GAL3ST2Q9H3Q3 398 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 RIMS4Q9H426 269 aaPredicted RBP5.66□□□□□ -1.5
LIMD1-204ENST00000474665 ESM1Q9NQ30 184 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 IDI2-AS1Q9NZ38 188 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 TRAPPC2LQ9UL33 140 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 PSG11Q9UQ72 335 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 A0A1W2PPH5 198 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 CCDC160A6NGH7 325 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 POM121CA8CG34 1229 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 GSTT2P0CG29 244 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 GSTT2BP0CG30 244 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 HNF1AP20823 631 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 FPR2P25090 351 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 NFYBP25208 207 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 PPP1CCP36873 323 aaKnown RBP5.65□□□□□ -1.5
LIMD1-204ENST00000474665 TAS2R20P59543 309 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 DIAPH2-AS1Q14236 149 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 FAM189A2Q15884 450 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 PNLIPRP3Q17RR3 467 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 IGSF11Q5DX21 431 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 CT45A1Q5HYN5 189 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 C6orf183Q5T699 404 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 GPR157Q5UAW9 335 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 CNIH2Q6PI25 160 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 Q6ZS49 121 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 LDLRAD3Q86YD5 345 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 ABHD12Q8N2K0 398 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 GVQW1Q8N7I0 195 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 SIGLECL1Q8N7X8 197 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 OR10A7Q8NGE5 316 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 OR52M1Q8NGK5 317 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 CT45A3Q8NHU0 189 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF596Q8TC21 504 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 PIFOQ8TCI5 191 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 SNAPC3Q92966 411 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 S100A16Q96FQ6 103 aaKnown RBP5.65□□□□□ -1.5
LIMD1-204ENST00000474665 ABHD1Q96SE0 405 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 OCSTAMPQ9BR26 566 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 CLEC7AQ9BXN2 247 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 HEXA-AS1Q9H8Q6 139 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 DIABLOQ9NR28 239 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 GFOD1Q9NXC2 390 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 OR1A1Q9P1Q5 309 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 ANAPC10Q9UM13 185 aa5.65□□□□□ -1.5
LIMD1-204ENST00000474665 hCG_1809904A0A1W2PP81 198 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 A0A1W2PPE2 198 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 A0A1W2PR64 198 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 A0A1W2PRV1 198 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 MEIS3P1A6NDR6 274 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 TRDCB7Z8K6 153 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 J3QR06 171 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 SDCBPO00560 298 aaPredicted RBP5.64□□□□□ -1.51
LIMD1-204ENST00000474665 FABP7O15540 132 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 SPINT2O43291 252 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 NOL3O60936 208 aaKnown RBP5.64□□□□□ -1.51
LIMD1-204ENST00000474665 SCGNO76038 276 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 FCER2P06734 321 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 DTYMKP23919 212 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 TNFSF8P32971 234 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 MNDAP41218 407 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 BPIFB3P59826 476 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 HLA-DRB3P79483 266 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 HTD2P86397 168 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 ARFRP1Q13795 201 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 SRSF7Q16629 238 aaKnown RBP eCLIP5.64□□□□□ -1.51
LIMD1-204ENST00000474665 HLA-DRB5Q30154 266 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 MORN2Q502X0 79 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 TMEM69Q5SWH9 247 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 MZT2AQ6P582 158 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 MOB1BQ7L9L4 216 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 LYSMD2Q8IV50 215 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 ODF3L1Q8IXM7 274 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 PRR18Q8N4B5 295 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 LINC00311Q8N616 119 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 ZDHHC22Q8N966 263 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 BEND2Q8NDZ0 799 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 OR10V1Q8NGI7 309 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 OR13D1Q8NGV5 346 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 MCFD2Q8NI22 146 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 SETD6Q8TBK2 473 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 GPX8Q8TED1 209 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 AP3S1Q92572 193 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 ST6GALNAC6Q969X2 333 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 RBMXL1Q96E39 390 aaKnown RBP5.64□□□□□ -1.51
LIMD1-204ENST00000474665 AGMATQ9BSE5 352 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 CABLES2Q9BTV7 478 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 CHMP1AQ9HD42 196 aaPredicted RBP5.64□□□□□ -1.51
LIMD1-204ENST00000474665 OR2S2Q9NQN1 319 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 NDUFA13Q9P0J0 144 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 EXTL2Q9UBQ6 330 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 A3GALT2U3KPV4 340 aa5.64□□□□□ -1.51
LIMD1-204ENST00000474665 NOTCH3Q9UM47 2321 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 TRBV6-7A0A0A0MS04 114 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 BUB1B-PAK6H3BSN5 160 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 YPEL1O60688 119 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 PROP1O75360 226 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 IGHV4-59P01825 116 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 ARG1P05089 322 aa5.63□□□□□ -1.51
LIMD1-204ENST00000474665 NAT1P18440 290 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms