RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 PRDX4Q13162 271 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 MLF2Q15773 248 aaPredicted RBP3.64□□□□□ -1.83
VPS50-210ENST00000471188 ZNF726P1Q15940 193 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 PLPPR5Q32ZL2 321 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 MORN2Q502X0 79 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 Q56UQ5 140 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 WDR73Q6P4I2 378 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 VN1R4Q7Z5H5 301 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 C1QL2Q7Z5L3 287 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 LYPD6Q86Y78 171 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 WFDC12Q8WWY7 111 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 ARRDC3Q96B67 414 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 SARAFQ96BY9 339 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 MSI2Q96DH6 328 aaKnown RBP3.64□□□□□ -1.83
VPS50-210ENST00000471188 C18orf12Q96KH6 178 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 HDAC8Q9BY41 377 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 LIME1Q9H400 295 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 CDH23Q9H251 3354 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 TRAV1-1A0A0B4J248 108 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 C3orf85A0A1B0GTC6 90 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 GAGE10A6NGK3 116 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 IGLON5A6NGN9 336 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 C9orf172C9J069 976 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 M0R1X1 148 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 TMEM50AO95807 157 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 GPX1P07203 203 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 FCGR2AP12318 317 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 IL12BP29460 328 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 ARR3P36575 388 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 CTRLP40313 264 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 HTD2P86397 168 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 CD226Q15762 336 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 HIST3H3Q16695 136 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 TCTN1Q2MV58 587 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 HLA-DRB5Q30154 266 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 FHL5Q5TD97 284 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 RAET1LQ5VY80 246 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 DGAT2L6Q6ZPD8 337 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 ATG4DQ86TL0 474 aaPredicted RBP3.64□□□□□ -1.83
VPS50-210ENST00000471188 ZNF439Q8NDP4 499 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 PIGTQ969N2 578 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 NUDT16L1Q9BRJ7 211 aaKnown RBP3.64□□□□□ -1.83
VPS50-210ENST00000471188 GTSF1LQ9H1H1 148 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 TP53TG3Q9ULZ0 132 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 RP1P56715 2156 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 IGLV1-36A0A0B4J1U3 117 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 CCL15-CCL14A0A0B4J2E2 113 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 UBE2L5PA0A1B0GUS4 154 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 IGLC7A0M8Q6 106 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 TMEM250H0YL14 139 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 RBFOX2O43251 390 aaKnown RBP eCLIP3.63□□□□□ -1.83
VPS50-210ENST00000471188 C3orf79P0CE67 100 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 PAX2Q02962 417 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 KISS1Q15726 138 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 NSDHLQ15738 373 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 CCL15Q16663 113 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 DNM1P34Q6PK57 102 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 RERGQ96A58 199 aaPredicted RBP3.63□□□□□ -1.83
VPS50-210ENST00000471188 NEIL1Q96FI4 390 aaPredicted RBP3.63□□□□□ -1.83
VPS50-210ENST00000471188 KLHDC3Q9BQ90 382 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 CCDC3Q9BQI4 270 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 WDR61Q9GZS3 305 aaKnown RBP3.63□□□□□ -1.83
VPS50-210ENST00000471188 S1PR5Q9H228 398 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 STARD5Q9NSY2 213 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 TP73-AS1Q9UF72 201 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 NAT8BQ9UHF3 227 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 CDC42EP3Q9UKI2 254 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 ANAPC10Q9UM13 185 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 MRPS16Q9Y3D3 137 aaKnown RBP3.63□□□□□ -1.83
VPS50-210ENST00000471188 MYO7AQ13402 2215 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 IGHV2-26A0A0B4J1V2 119 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 C11orf94C9JXX5 98 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 NPIPA5E9PKD4 350 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 ANGPTL7O43827 346 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 SERPINE2P07093 398 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 FUT6P51993 359 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 RPS15AP62244 130 aaKnown RBP3.63□□□□□ -1.83
VPS50-210ENST00000471188 PSG9Q00887 426 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 DLX2Q07687 328 aaPredicted RBP3.63□□□□□ -1.83
VPS50-210ENST00000471188 PDCD1Q15116 288 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 IZUMO4Q1ZYL8 232 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 PRTGQ2VWP7 1150 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 LRRC10Q5BKY1 277 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 LY6G5CQ5SRR4 150 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 TMEM215Q68D42 235 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 VASH2Q86V25 355 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 PRR22Q8IZ63 422 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 SELENOHQ8IZQ5 122 aaKnown RBP3.63□□□□□ -1.83
VPS50-210ENST00000471188 OR5AS1Q8N127 324 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 FER1L6-AS1Q8NA97 138 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 OR10V1Q8NGI7 309 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 OR14C36Q8NHC7 312 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 MBD3L1Q8WWY6 194 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 CTHRC1Q96CG8 243 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 LRRC3BQ96PB8 259 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 AGMATQ9BSE5 352 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 CHRDL1Q9BU40 450 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 EMC6Q9BV81 110 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 RAB11FIP5Q9BXF6 653 aa3.63□□□□□ -1.83
VPS50-210ENST00000471188 ELOVL5Q9NYP7 299 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms