RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 VSIG10L2P0DP72 767 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 ATP5J2P56134 94 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 DHODHQ02127 395 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 TMEM128Q5BJH2 165 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 WDR25Q64LD2 544 aaPredicted RBP12.5□□□□□ -0.41
COL4A5-203ENST00000470339 TMED4Q7Z7H5 227 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 FGFRL1Q8N441 504 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 ZNF525Q8N782 197 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 C8orf46Q8TAG6 207 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 H1FXQ92522 213 aaKnown RBP12.5□□□□□ -0.41
COL4A5-203ENST00000470339 NINJ1Q92982 152 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 DMRTB1Q96MA1 342 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 OR2S2Q9NQN1 319 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 C19orf12Q9NSK7 152 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 RDH8Q9NYR8 311 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 OR1A1Q9P1Q5 309 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 MALRD1Q5VYJ5 2156 aa12.5□□□□□ -0.41
COL4A5-203ENST00000470339 SPG11Q96JI7 2443 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 A0A1W2PPH5 198 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 ITGB1BP1O14713 200 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 YPEL1O60688 119 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 RGS11O94810 467 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 OR4E1P0C645 316 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 TRAPPC2P0DI81 140 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 TRAPPC2BP0DI82 140 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 LUMP51884 338 aaPredicted RBP12.49□□□□□ -0.41
COL4A5-203ENST00000470339 LOXL3P58215 753 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 MSMO1Q15800 293 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 FAM185AQ8N0U4 392 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 OR10V1Q8NGI7 309 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 RFESDQ8TAC1 157 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 FAM168AQ92567 244 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 TOMM40LQ969M1 308 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 ZNF714Q96N38 554 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 YPEL2Q96QA6 119 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 OR51J1Q9H342 316 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 IDI2-AS1Q9NZ38 188 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 ZNF221Q9UK13 617 aa12.49□□□□□ -0.41
COL4A5-203ENST00000470339 HMX3A6NHT5 357 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 CREBL2O60519 120 aaPredicted RBP12.48□□□□□ -0.41
COL4A5-203ENST00000470339 SLC22A5O76082 557 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 GNRHRP30968 328 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 FXYD4P59646 89 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 RND3P61587 244 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 MORN2Q502X0 79 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 C4orf46Q504U0 113 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 CD276Q5ZPR3 534 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 ZNF626Q68DY1 528 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 C11orf88Q6PI97 169 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 CLEC2AQ6UVW9 174 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 HEPN1Q6WQI6 88 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 ADAD2Q8NCV1 583 aaKnown RBP12.48□□□□□ -0.41
COL4A5-203ENST00000470339 LY6G5BQ8NDX9 201 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 OR52L2PQ8NGH6 319 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 UBALD1Q8TB05 177 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 C10orf105Q8TEF2 133 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 ZNF431Q8TF32 576 aaPredicted RBP12.48□□□□□ -0.41
COL4A5-203ENST00000470339 EDARADDQ8WWZ3 215 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 RAB39BQ96DA2 213 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 AKR1E2Q96JD6 320 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 PIMREGQ9BSJ6 248 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 BEX2Q9BXY8 128 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 SLC5A7Q9GZV3 580 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 BEX1Q9HBH7 125 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 BEX4Q9NWD9 120 aaPredicted RBP12.48□□□□□ -0.41
COL4A5-203ENST00000470339 GFOD1Q9NXC2 390 aa12.48□□□□□ -0.41
COL4A5-203ENST00000470339 IGKV1D-13A0A0B4J2D9 117 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 VWC2LB2RUY7 222 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 GPR31O00270 319 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 IGHV2-5P01817 119 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 RBP4P02753 201 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 IGKV1-13P0DP09 117 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 AKR1C4P17516 323 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 DLX6P56179 175 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 GNB2P62879 340 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 BAMBIQ13145 260 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 ZNF273Q14593 569 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 Q3ZCU0 254 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 ABCA11PQ4W5N1 156 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 ESCO2Q56NI9 601 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 LYG2Q86SG7 212 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 CCDC71LQ8N9Z2 235 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 ZBTB34Q8NCN2 500 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 SECTM1Q8WVN6 248 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 CAPSLQ8WWF8 208 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 TMEM230Q96A57 120 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 SSBP3Q9BWW4 388 aaPredicted RBP12.47□□□□□ -0.41
COL4A5-203ENST00000470339 GNG12Q9UBI6 72 aa12.47□□□□□ -0.41
COL4A5-203ENST00000470339 RPUSD1Q9UJJ7 312 aaKnown RBP12.47□□□□□ -0.41
COL4A5-203ENST00000470339 ANKRD17O75179 2603 aaKnown RBP12.47□□□□□ -0.41
COL4A5-203ENST00000470339 C9orf170A2RU37 121 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 CRYM-AS1A6NIL9 109 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 C17orf98A8MV24 154 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 S100GP29377 79 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 PPP1CCP36873 323 aaKnown RBP12.46□□□□□ -0.41
COL4A5-203ENST00000470339 PIGPP57054 158 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 RRAS2P62070 204 aaPredicted RBP12.46□□□□□ -0.41
COL4A5-203ENST00000470339 CBX3Q13185 183 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 DHRS2Q13268 280 aa12.46□□□□□ -0.41
COL4A5-203ENST00000470339 PPP1R1AQ13522 171 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms