RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 NKX2-6A6NCS4 301 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 ZSCAN5BA6NJL1 495 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 VSTM5A8MXK1 200 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 C12orf77C9JDV5 145 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 FAM90A26D6RGX4 464 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 C15orf65H3BRN8 121 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 K7N7A8 449 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 HSPA12AO43301 675 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 ATG12O94817 140 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 SERPINE2P07093 398 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 SEC11BP0C7V7 166 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 FAM157CP0CG43 387 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 PSG2P11465 335 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 ZP3P21754 424 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 BMP5P22003 454 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 CCKARP32238 428 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 CEACAM6P40199 344 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 NKX2-1P43699 371 aaPredicted RBP6.38□□□□□ -1.39
COL6A3-208ENST00000468792 ARHGDIBP52566 201 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 TMEM33P57088 247 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 S100A10P60903 97 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 COL10A1Q03692 680 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 BAXQ07812 192 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 EIF4EBP1Q13541 118 aaPredicted RBP6.38□□□□□ -1.39
COL6A3-208ENST00000468792 FBXL19-AS1Q494R0 122 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 BEX5Q5H9J7 111 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 PRAMEF6Q5VXH4 476 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 THOC7Q6I9Y2 204 aaKnown RBP6.38□□□□□ -1.39
COL6A3-208ENST00000468792 ZNF66Q6ZN08 573 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 ZNF826PQ6ZT77 177 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 LRP11Q86VZ4 500 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 FAM219AQ8IW50 185 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 CCDC28AQ8IWP9 274 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 GCSAMQ8N6F7 178 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 CD177Q8N6Q3 437 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 ZNF645Q8N7E2 425 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 DMBX1Q8NFW5 382 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 LRRC29Q8WV35 223 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 SDSLQ96GA7 329 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 COQ2Q96H96 371 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 SMIM8Q96KF7 97 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 OR2V2Q96R30 315 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 SLC25A31Q9H0C2 315 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 FAM234AQ9H0X4 552 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 LINC00574Q9H8X3 128 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 PGPEP1Q9NXJ5 209 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 DUSP13Q9UII6 198 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 PRR14LQ5THK1 2151 aa6.38□□□□□ -1.39
COL6A3-208ENST00000468792 IGKV1D-17A0A075B6S4 117 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 BORCS7-ASMTA0A0B4J1R7 106 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 ATP6V1G2-DDX39BF2Z307 99 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 TEX46H3BTG2 121 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 I3L521 148 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 F2RL2O00254 374 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 HSD17B6O14756 317 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 WNT9BO14905 357 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 SPINT2O43291 252 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 YPEL1O60688 119 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 HBZP02008 142 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 CGB3P0DN86 165 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 CGB7P0DN87 165 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 MUC1P15941 1255 aaPredicted RBP6.37□□□□□ -1.39
COL6A3-208ENST00000468792 SPINK2P20155 84 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 M6PRP20645 277 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 IL2RGP31785 369 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 SULT1A2P50226 295 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 RAB5CP51148 216 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 TAS2R30P59541 319 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 KRBOX4Q5JUW0 171 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 FAM209AQ5JX71 171 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 TEX36Q5VZQ5 186 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 MEX3BQ6ZN04 569 aaKnown RBP6.37□□□□□ -1.39
COL6A3-208ENST00000468792 ZNF561Q8N587 486 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 OR2C3Q8N628 320 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 DRAM1Q8N682 238 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 RELL2Q8NC24 303 aaPredicted RBP6.37□□□□□ -1.39
COL6A3-208ENST00000468792 OR52M1Q8NGK5 317 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 LYPD6BQ8NI32 183 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 IL1F10Q8WWZ1 152 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 EDARADDQ8WWZ3 215 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 RND1Q92730 232 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 NINJ1Q92982 152 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 MARC2Q969Z3 335 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 CXorf58Q96LI9 332 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 YPEL2Q96QA6 119 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 RAB40CQ96S21 281 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 GINS3Q9BRX5 216 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 MRPL37Q9BZE1 423 aaKnown RBP6.37□□□□□ -1.39
COL6A3-208ENST00000468792 HIPK2Q9H2X6 1198 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 GCM1Q9NP62 436 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 LYRM2Q9NU23 88 aaPredicted RBP6.37□□□□□ -1.39
COL6A3-208ENST00000468792 ASF1BQ9NVP2 202 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 OR6C3Q9NZP0 311 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 OR1A1Q9P1Q5 309 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 RNF7Q9UBF6 113 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 LPAR3Q9UBY5 353 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 FBXL17Q9UF56 701 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 OR14J1Q9UGF5 321 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 CACFD1Q9UGQ2 172 aa6.37□□□□□ -1.39
COL6A3-208ENST00000468792 JPT1Q9UK76 154 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms