RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 MANBALQ9NQG1 85 aa16.85■□□□□ 0.29
SDF4-205ENST00000465727 IGKV1-6A0A0C4DH72 117 aa16.85■□□□□ 0.29
SDF4-205ENST00000465727 A0A1W2PPQ1 181 aa16.85■□□□□ 0.29
SDF4-205ENST00000465727 TOX3O15405 576 aaPredicted RBP16.85■□□□□ 0.29
SDF4-205ENST00000465727 TNFSF12O43508 249 aa16.85■□□□□ 0.29
SDF4-205ENST00000465727 NXPH1P58417 271 aa16.85■□□□□ 0.29
SDF4-205ENST00000465727 KCNIP4Q6PIL6 250 aa16.85■□□□□ 0.29
SDF4-205ENST00000465727 GBGT1Q8N5D6 347 aa16.85■□□□□ 0.29
SDF4-205ENST00000465727 MRPL30Q8TCC3 161 aaKnown RBP16.85■□□□□ 0.29
SDF4-205ENST00000465727 FUT9Q9Y231 359 aa16.85■□□□□ 0.29
SDF4-205ENST00000465727 OR2W1Q9Y3N9 320 aa16.85■□□□□ 0.29
SDF4-205ENST00000465727 KIR2DL5BA0A0G2JN68 375 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 KIR2DL5BA0A0G2JPC4 375 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 LRRC3CA6NJW4 275 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 OR4A8P0C604 315 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 PSG4Q00888 419 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 ARL16Q0P5N6 197 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 KIR2DL5AQ8N109 375 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 TAF15Q92804 592 aaKnown RBP eCLIP16.84■□□□□ 0.29
SDF4-205ENST00000465727 OR2H1Q9GZK4 316 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 PARLQ9H300 379 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 CHD3Q12873 2000 aaKnown RBP16.84■□□□□ 0.29
SDF4-205ENST00000465727 EML6Q6ZMW3 1958 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 TMEM210A6NLX4 147 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 CD300LBA8K4G0 201 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 M0QZK8 103 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 COX5BP10606 129 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 CNN1P51911 297 aaKnown RBP16.84■□□□□ 0.29
SDF4-205ENST00000465727 CASP6P55212 293 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 PCSK4Q6UW60 755 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 SYT13Q7L8C5 426 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 DEFB119Q8N690 84 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 RPUSD4Q96CM3 377 aaKnown RBP16.84■□□□□ 0.29
SDF4-205ENST00000465727 STRADBQ9C0K7 418 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 CACNG5Q9UF02 275 aa16.84■□□□□ 0.29
SDF4-205ENST00000465727 TRBV6-6A0A0A6YYG2 114 aa16.83■□□□□ 0.28
SDF4-205ENST00000465727 EPOPA6NHQ4 379 aa16.83■□□□□ 0.28
SDF4-205ENST00000465727 GJE1A6NN92 205 aa16.83■□□□□ 0.28
SDF4-205ENST00000465727 PSG2P11465 335 aa16.83■□□□□ 0.28
SDF4-205ENST00000465727 BCL3P20749 454 aa16.83■□□□□ 0.28
SDF4-205ENST00000465727 HAPLN4Q86UW8 402 aa16.83■□□□□ 0.28
SDF4-205ENST00000465727 DEFB123Q8N688 67 aa16.83■□□□□ 0.28
SDF4-205ENST00000465727 TMEM37Q8WXS4 190 aa16.83■□□□□ 0.28
SDF4-205ENST00000465727 IMMP2LQ96T52 175 aa16.83■□□□□ 0.28
SDF4-205ENST00000465727 TNFSF11O14788 317 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 CYC1P08574 325 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 LIFP15018 202 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 TDGF1P3P51864 188 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 RAC1P63000 192 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 RPP25LQ8N5L8 163 aaKnown RBP16.82■□□□□ 0.28
SDF4-205ENST00000465727 TSTD1Q8NFU3 115 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 WNT5BQ9H1J7 359 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 FKBP11Q9NYL4 201 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 KIAA2026Q5HYC2 2103 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 CTXND1A0A1B0GTU2 59 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 MBP02144 154 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 IAPPP10997 89 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 B4GALT1P15291 398 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 ELLP55199 621 aaPredicted RBP16.82■□□□□ 0.28
SDF4-205ENST00000465727 ZNF324BQ6AW86 544 aaPredicted RBP16.82■□□□□ 0.28
SDF4-205ENST00000465727 TEX38Q6PEX7 206 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 Q6ZRM9 215 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 LINC00596Q86U02 117 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 OR51H1Q8NH63 302 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 OR10J5Q8NHC4 309 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 NEK7Q8TDX7 302 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 OR4C12Q96R67 309 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 ATG101Q9BSB4 218 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 C1QTNF5Q9BXJ0 243 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 PRDM14Q9GZV8 571 aa16.82■□□□□ 0.28
SDF4-205ENST00000465727 SCRG1O75711 98 aa16.81■□□□□ 0.28
SDF4-205ENST00000465727 CRYABP02511 175 aaKnown RBP16.81■□□□□ 0.28
SDF4-205ENST00000465727 SFTPCP11686 197 aa16.81■□□□□ 0.28
SDF4-205ENST00000465727 DCAF10Q5QP82 559 aa16.81■□□□□ 0.28
SDF4-205ENST00000465727 CLDN23Q96B33 292 aa16.81■□□□□ 0.28
SDF4-205ENST00000465727 FOXB1Q99853 325 aa16.81■□□□□ 0.28
SDF4-205ENST00000465727 ELOVL1Q9BW60 279 aa16.81■□□□□ 0.28
SDF4-205ENST00000465727 A0A0J9YW62 118 aa16.81■□□□□ 0.28
SDF4-205ENST00000465727 FAM90A26D6RGX4 464 aa16.81■□□□□ 0.28
SDF4-205ENST00000465727 ZIC3O60481 467 aa16.81■□□□□ 0.28
SDF4-205ENST00000465727 EDN3P14138 238 aa16.81■□□□□ 0.28
SDF4-205ENST00000465727 CD99P14209 185 aa16.81■□□□□ 0.28
SDF4-205ENST00000465727 GYPAP02724 150 aa16.8■□□□□ 0.28
SDF4-205ENST00000465727 OR10J1P30954 320 aa16.8■□□□□ 0.28
SDF4-205ENST00000465727 RAC3P60763 192 aa16.8■□□□□ 0.28
SDF4-205ENST00000465727 GNB2P62879 340 aa16.8■□□□□ 0.28
SDF4-205ENST00000465727 SLC38A11Q08AI6 406 aa16.8■□□□□ 0.28
SDF4-205ENST00000465727 RIPPLY2Q5TAB7 128 aa16.8■□□□□ 0.28
SDF4-205ENST00000465727 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.8■□□□□ 0.28
SDF4-205ENST00000465727 MKXQ8IYA7 352 aa16.8■□□□□ 0.28
SDF4-205ENST00000465727 TNRC6BQ9UPQ9 1833 aaKnown RBP16.79■□□□□ 0.28
SDF4-205ENST00000465727 NPIPB11E5RHQ5 1161 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 TIAF1O95411 115 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 SCGB1D1O95968 90 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 RTP5Q14D33 572 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 FAM180AQ6UWF9 173 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 BATF2Q8N1L9 274 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 CADM4Q8NFZ8 388 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 SRXN1Q9BYN0 137 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 PCED1AQ9H1Q7 454 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms