RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 TMEM229BQ8NBD8 167 aa11.34□□□□□ -0.59
PHACTR4-203ENST00000463428 PCGF1Q9BSM1 259 aa11.34□□□□□ -0.59
PHACTR4-203ENST00000463428 TMEM133Q9H2Q1 129 aa11.34□□□□□ -0.59
PHACTR4-203ENST00000463428 OR1A1Q9P1Q5 309 aa11.34□□□□□ -0.59
PHACTR4-203ENST00000463428 JPT1Q9UK76 154 aa11.34□□□□□ -0.59
PHACTR4-203ENST00000463428 F8P00451 2351 aa11.34□□□□□ -0.59
PHACTR4-203ENST00000463428 ANKRD20A5PA0PJZ0 165 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 RNASEK-C17orf49H0YIS7 233 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 YPEL1O60688 119 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 CD74P04233 296 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 CTXN2P0C2S0 81 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 HOXB4P17483 251 aaPredicted RBP11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 HLA-DMAP28067 261 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 KLRD1Q13241 179 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 MORN2Q502X0 79 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 KLF17Q5JT82 389 aaPredicted RBP11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 LY6G6FQ5SQ64 297 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 STEAP3Q658P3 488 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 OVCH2Q7RTZ1 564 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 IL1F10Q8WWZ1 152 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 YPEL2Q96QA6 119 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 SUCNR1Q9BXA5 334 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 WDR12Q9GZL7 423 aaKnown RBP11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 OR2S2Q9NQN1 319 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 KCNS2Q9ULS6 477 aa11.33□□□□□ -0.6
PHACTR4-203ENST00000463428 IGHV2-26A0A0B4J1V2 119 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 CENPVL3A0A0U1RRI6 287 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 FAM172BPA6NC97 362 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 J3QRK9 145 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 FSHBP01225 129 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 PMP2P02689 132 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 CD3DP04234 171 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 IL7P13232 177 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 NFYBP25208 207 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 RFX2P48378 723 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 ZNF134P52741 427 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 KLF9Q13886 244 aaPredicted RBP11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 CDK10Q15131 360 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 Q3ZCU0 254 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 CHRFAM7AQ494W8 412 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 ZNF439Q8NDP4 499 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 OR11H6Q8NGC7 330 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 ZNF596Q8TC21 504 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 LEAP2Q969E1 77 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 CCDC32Q9BV29 185 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 HEXA-AS1Q9H8Q6 139 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 TAS2R8Q9NYW2 309 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 SLC23A1Q9UHI7 598 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 PSG11Q9UQ72 335 aa11.32□□□□□ -0.6
PHACTR4-203ENST00000463428 MAST4O15021 2626 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 ZNF736B4DX44 427 aaPredicted RBP11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 BET1O15155 118 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 IGHV3-7P01780 117 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 CSF1P09603 554 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 ZBTB25P24278 435 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 HRH1P35367 487 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 PPP1CCP36873 323 aaKnown RBP11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 CEACAM6P40199 344 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 TAS2R46P59540 309 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 TAS2R19P59542 299 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 ARPC4P59998 168 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 DYRK1AQ13627 763 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 VAX1Q5SQQ9 334 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 NCR3LG1Q68D85 454 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 ZNF660Q6AZW8 331 aaPredicted RBP11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 H1FOOQ8IZA3 346 aaPredicted RBP11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 ABHD12Q8N2K0 398 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 OR10V1Q8NGI7 309 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 OR13D1Q8NGV5 346 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 OR5H2Q8NGV7 314 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 LHX4Q969G2 390 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 TSC22D3Q99576 134 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 TINAGL1Q9GZM7 467 aaPredicted RBP11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 PARP12Q9H0J9 701 aaKnown RBP11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 GSX1Q9H4S2 264 aaPredicted RBP11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 YAE1D1Q9NRH1 226 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 NECAP2Q9NVZ3 263 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 GNG12Q9UBI6 72 aa11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 SONP18583 2426 aaKnown RBP11.31□□□□□ -0.6
PHACTR4-203ENST00000463428 A8MV72 311 aaPredicted RBP11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 ODF3BA8MYP8 253 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 J3QR06 171 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 M0QYG6 137 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 ITGB1BP1O14713 200 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 SLC31A2O15432 143 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 TUSC2O75896 110 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 IGLV1-47P01700 117 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 ZNF735P0CB33 412 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 OR5H8P0DN80 308 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 IGHV4-38-2P0DP08 117 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 TBPP20226 339 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 OR3A3P47888 321 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 UBE2E1P51965 193 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 CT45A1Q5HYN5 189 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 ZNF626Q68DY1 528 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 STEAP1BQ6NZ63 245 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 DHRS11Q6UWP2 260 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 LDLRAD3Q86YD5 345 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 PNKDQ8N490 385 aa11.3□□□□□ -0.6
PHACTR4-203ENST00000463428 LINC00311Q8N616 119 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms