RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 DUXBA0A1W2PPF3 345 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 MEX3AA1L020 520 aaKnown RBP8.51□□□□□ -1.05
MSH5-211ENST00000463144 OOEPA6NGQ2 149 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 C16orf97H3BN30 126 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 TAAR5O14804 337 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 ZNF737O75373 536 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 LHBP01229 141 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 HBZP02008 142 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 GNMTQ14749 295 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 KRBOX4Q5JUW0 171 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 DRAM1Q8N682 238 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 BOLLQ8N9W6 283 aaKnown RBP8.51□□□□□ -1.05
MSH5-211ENST00000463144 OR13A1Q8NGR1 328 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 MRGPRDQ8TDS7 321 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 IL22RA2Q969J5 263 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 DCTN5Q9BTE1 182 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 WFDC1Q9HC57 220 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 ELOVL5Q9NYP7 299 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 KCNIP1Q9NZI2 227 aa8.51□□□□□ -1.05
MSH5-211ENST00000463144 DPRXA6NFQ7 191 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 GPR137BO60478 399 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 VDAC1P21796 283 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 P2RY1P47900 373 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 POLR2GP62487 172 aaKnown RBP eCLIP8.5□□□□□ -1.05
MSH5-211ENST00000463144 ZNF585BQ52M93 769 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 OR1S2Q8NGQ3 325 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 GALMQ96C23 342 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 C5orf30Q96GV9 206 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 AKR1E2Q96JD6 320 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 TOLLIPQ9H0E2 274 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 RAXQ9Y2V3 346 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 SMG1Q96Q15 3661 aaKnown RBP8.5□□□□□ -1.05
MSH5-211ENST00000463144 SSTR5P35346 364 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 NKX2-1P43699 371 aaPredicted RBP8.5□□□□□ -1.05
MSH5-211ENST00000463144 TMPRSS3P57727 454 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 ID3Q02535 119 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 NHLH2Q02577 135 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 MST1LQ2TV78 715 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 FAM201AQ5SY85 155 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 C1QTNF12Q5T7M4 302 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 WFDC8Q8IUA0 241 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 CCDC28AQ8IWP9 274 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 GPR146Q96CH1 333 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 MAGT1Q9H0U3 335 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 ZFP57Q9NU63 452 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 RNF150Q9ULK6 438 aa8.5□□□□□ -1.05
MSH5-211ENST00000463144 RBM7Q9Y580 266 aaKnown RBP8.5□□□□□ -1.05
MSH5-211ENST00000463144 PITX3O75364 302 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 SCO1O75880 301 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 TMEM50AO95807 157 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 IGHV1-46P01743 117 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 GAPDHP04406 335 aaKnown RBP8.49□□□□□ -1.05
MSH5-211ENST00000463144 S100GP29377 79 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 IL2RGP31785 369 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 RPS23P62266 143 aaKnown RBP8.49□□□□□ -1.05
MSH5-211ENST00000463144 PAX5Q02548 391 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 IZUMO4Q1ZYL8 232 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 TUSC1Q2TAM9 212 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 GPR157Q5UAW9 335 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 Q6ZRM9 215 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 FAM90A1Q86YD7 464 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 ODF3L1Q8IXM7 274 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 STPG2Q8N412 459 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 NUP37Q8NFH4 326 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 RNF141Q8WVD5 230 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 LURAP1Q96LR2 239 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 SPIN2AQ99865 258 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 SPIN2BQ9BPZ2 258 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 DNTTIP1Q9H147 329 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 ESRP2Q9H6T0 727 aaKnown RBP8.49□□□□□ -1.05
MSH5-211ENST00000463144 SEBOXQ9HB31 216 aaPredicted RBP8.49□□□□□ -1.05
MSH5-211ENST00000463144 KCNS2Q9ULS6 477 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 CACNA1DQ01668 2161 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 MAP1BP46821 2468 aaKnown RBP8.49□□□□□ -1.05
MSH5-211ENST00000463144 FAM24AA6NFZ4 105 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 KIAA1324LA8MWY0 1029 aaPredicted RBP8.49□□□□□ -1.05
MSH5-211ENST00000463144 C15orf65H3BRN8 121 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 ATXN7O15265 892 aaPredicted RBP8.49□□□□□ -1.05
MSH5-211ENST00000463144 NXPH3O95157 252 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 SERPINE2P07093 398 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 ZP3P21754 424 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 PPP1CCP36873 323 aaKnown RBP8.49□□□□□ -1.05
MSH5-211ENST00000463144 GATA4P43694 442 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 EIF4EBP1Q13541 118 aaPredicted RBP8.49□□□□□ -1.05
MSH5-211ENST00000463144 EDDM3AQ14507 147 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 TMEM108Q6UXF1 575 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 RFESDQ8TAC1 157 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 LRRC20Q8TCA0 184 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 ARV1Q9H2C2 271 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 GCM1Q9NP62 436 aa8.49□□□□□ -1.05
MSH5-211ENST00000463144 ICE1Q9Y2F5 2266 aa8.48□□□□□ -1.05
MSH5-211ENST00000463144 DSCAMO60469 2012 aa8.48□□□□□ -1.05
MSH5-211ENST00000463144 IGHV3-43A0A0B4J1X8 118 aa8.48□□□□□ -1.05
MSH5-211ENST00000463144 IGSF23A1L1A6 192 aa8.48□□□□□ -1.05
MSH5-211ENST00000463144 SSSCA1O60232 199 aa8.48□□□□□ -1.05
MSH5-211ENST00000463144 JTBO76095 146 aa8.48□□□□□ -1.05
MSH5-211ENST00000463144 IGKV1-5P01602 117 aa8.48□□□□□ -1.05
MSH5-211ENST00000463144 IGHV3-43DP0DP04 118 aa8.48□□□□□ -1.05
MSH5-211ENST00000463144 EWSR1Q01844 656 aaKnown RBP eCLIP8.48□□□□□ -1.05
MSH5-211ENST00000463144 TGIF2LYQ8IUE0 185 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms