RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 KNL1Q8NG31 2342 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 SDK1Q7Z5N4 2213 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 LRRC3CA6NJW4 275 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 DEFB108AA8MXU0 73 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 SOD3P08294 240 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 SMIM10L1P0DMW3 83 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 CD1BP29016 333 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 C9orf40Q8IXQ3 194 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 OR5A2Q8NGI9 324 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 SMIM10Q96HG1 83 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 EGLN1Q9GZT9 426 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 SAP30LQ9HAJ7 183 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 FOXJ2Q9P0K8 574 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 SRD5A2P31213 254 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 G6PCP35575 357 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 CTAG1AP78358 180 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 WIPI1Q5MNZ9 446 aaPredicted RBP13.73□□□□□ -0.21
SMC4-204ENST00000462787 C6orf15Q6UXA7 325 aaPredicted RBP13.73□□□□□ -0.21
SMC4-204ENST00000462787 OR4C12Q96R67 309 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 OR2H1Q9GZK4 316 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 BARX1Q9HBU1 254 aaPredicted RBP13.73□□□□□ -0.21
SMC4-204ENST00000462787 TMEM265A0A087WTH1 108 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 IGSF23A1L1A6 192 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 UNC119Q13432 240 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 SMAD4Q13485 552 aaKnown RBP13.73□□□□□ -0.21
SMC4-204ENST00000462787 TEPPQ6URK8 271 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 HEPN1Q6WQI6 88 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 ZNF721Q8TF20 911 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 STRCP1A6NGW2 1772 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 COL10A1Q03692 680 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 OR1C1Q15619 314 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 VMA21Q3ZAQ7 101 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 CYP2G1PQ6ZSU1 146 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 PDPNQ86YL7 162 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 GABRG3Q99928 467 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 P01737 135 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.73□□□□□ -0.21
SMC4-204ENST00000462787 MRGPRDQ8TDS7 321 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 GPR146Q96CH1 333 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 Q96M66 194 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 NGBQ9NPG2 151 aa13.73□□□□□ -0.21
SMC4-204ENST00000462787 IGHMP01871 453 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 OPRK1P41145 380 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 JOSD1Q15040 202 aaPredicted RBP13.72□□□□□ -0.21
SMC4-204ENST00000462787 DHRS13Q6UX07 377 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 ARL6IP6Q8N6S5 226 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 OR10D3Q8NH80 312 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 RTBDNQ9BSG5 229 aaPredicted RBP13.72□□□□□ -0.21
SMC4-204ENST00000462787 FAM117AQ9C073 453 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 TMEM38BQ9NVV0 291 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 SHANK3Q9BYB0 1731 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 J3QT63 122 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 RAMP1O60894 148 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 GNB1P62873 340 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 DMWDQ09019 674 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 RIGQ13278 110 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 FNDC7Q5VTL7 733 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 OPN3Q9H1Y3 402 aaPredicted RBP13.72□□□□□ -0.21
SMC4-204ENST00000462787 CLN8Q9UBY8 286 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 IGHV1OR21-1A0A087WYE8 117 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 HIST1H2BKO60814 126 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 HIST1H2BJP06899 126 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 CSN3P07498 182 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 HIST1H2BOP23527 126 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 HIST1H2BBP33778 126 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 HIST1H2BDP58876 126 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 HIST1H2BCP62807 126 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 HIST2H2BEQ16778 126 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.72□□□□□ -0.21
SMC4-204ENST00000462787 TMEM240Q5SV17 173 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 ZCCHC14Q8WYQ9 949 aaKnown RBP13.72□□□□□ -0.21
SMC4-204ENST00000462787 HIST1H2BHQ93079 126 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 HIST1H2BNQ99877 126 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 HIST1H2BMQ99879 126 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 OR6C3Q9NZP0 311 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 LOC390937A0A1W2PQ73 354 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 VEGFBP49765 207 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 RNPS1Q15287 305 aaKnown RBP13.72□□□□□ -0.21
SMC4-204ENST00000462787 RBBP6Q7Z6E9 1792 aaKnown RBP13.72□□□□□ -0.21
SMC4-204ENST00000462787 CDC42EP3Q9UKI2 254 aa13.72□□□□□ -0.21
SMC4-204ENST00000462787 ZNF646O15015 1829 aaPredicted RBP13.71□□□□□ -0.21
SMC4-204ENST00000462787 CORTO00230 105 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 HPRT1P00492 218 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 DEFB108BQ8NET1 73 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 COL25A1Q9BXS0 654 aaPredicted RBP13.71□□□□□ -0.21
SMC4-204ENST00000462787 PGLYRP1O75594 196 aaPredicted RBP13.71□□□□□ -0.21
SMC4-204ENST00000462787 MFAP2P55001 183 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 SLC25A47Q6Q0C1 308 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 MENTQ9BUN1 341 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 AAMDCQ9H7C9 122 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 HBZP02008 142 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 STAG3L2P0CL84 134 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 SCGB1C2P0DMR2 95 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 FGF5P12034 268 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 FAM27BQ5VT28 67 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 OR8I2Q8N0Y5 310 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 RNF122Q9H9V4 155 aa13.71□□□□□ -0.21
SMC4-204ENST00000462787 IGHV3-43A0A0B4J1X8 118 aa13.71□□□□□ -0.22
SMC4-204ENST00000462787 CELA2BP08218 269 aaPredicted RBP13.71□□□□□ -0.22
SMC4-204ENST00000462787 ZNF735P0CB33 412 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms