RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 LOC102724200A0A096LPH7 203 aaPredicted RBP11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 H3BML4 177 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 DHRS3O75911 302 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 VAMP5O95183 116 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 CDKN1AP38936 164 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 PRAMEF20Q5VT98 475 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 MAFAQ8NHW3 353 aaPredicted RBP11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 MAGT1Q9H0U3 335 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 VDAC3Q9Y277 283 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 CABIN1Q9Y6J0 2220 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 IGHV2OR16-5A0A0B4J2B6 119 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 CRYM-AS1A6NIL9 109 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 GCH1P30793 250 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 BSXQ3C1V8 233 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 Q6ZN92 141 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 SMIM7Q9BQ49 75 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 IL19Q9UHD0 177 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 NAT8Q9UHE5 227 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 SLC45A2Q9UMX9 530 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 TCN2P20062 427 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 OR5AS1Q8N127 324 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 DYRK2Q92630 601 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 RPUSD4Q96CM3 377 aaKnown RBP11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 ZNF391Q9UJN7 358 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 UBE2NP61088 152 aaKnown RBP11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 TMEM95Q3KNT9 176 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 TMEM41BQ5BJD5 291 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 CALHM1Q8IU99 346 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 RTN4IP1Q8WWV3 396 aaPredicted RBP11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 OR6C1Q96RD1 312 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 PLK3Q9H4B4 646 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 ZNF665Q9H7R5 613 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 ANXA10Q9UJ72 324 aa11.59□□□□□ -0.55
SYNGAP1-204ENST00000449372 CLEC18AA5D8T8 446 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 ZFAND5O76080 213 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 SYNGR4O95473 234 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 TMEM50BP56557 158 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 PIGPP57054 158 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 TPPP2P59282 170 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 RTP5Q14D33 572 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 SHISA6Q6ZSJ9 500 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 CLEC18CQ8NCF0 446 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 TMEM171Q8WVE6 324 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 HSPB9Q9BQS6 159 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 IGHV3-20A0A0C4DH32 117 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 GLI4P10075 376 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 CPEB2Q7Z5Q1 589 aaKnown RBP11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 LOXL4Q96JB6 756 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 OR51I2Q9H344 312 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 MANBALQ9NQG1 85 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 KLHL13Q9P2N7 655 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 UQCR10Q9UDW1 63 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 TRAPPC1Q9Y5R8 145 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 CEBPZOSA8MTT3 80 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 NPIPA2E9PIF3 369 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 PITX3O75364 302 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 HPNP05981 417 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 HLA-DOBP13765 273 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 VAMP3Q15836 100 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 MCEMP1Q8IX19 187 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 OR5C1Q8NGR4 320 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 BORCS8Q96FH0 119 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 SPACA5Q96QH8 159 aa11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 PATZ1Q9HBE1 687 aaKnown RBP11.58□□□□□ -0.56
SYNGAP1-204ENST00000449372 TRAV34A0A0B4J273 112 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 ZNF732B4DXR9 585 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 CDS2O95674 445 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 IFNA1P01562 189 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 IFNA5P01569 189 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 HINT1P49773 126 aaPredicted RBP11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 OR8B8Q15620 311 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 LIAT1Q6ZQX7 453 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 OR4B1Q8NGF8 309 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 EMC6Q9BV81 110 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 ST3GAL6Q9Y274 331 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 IGSF23A1L1A6 192 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 NPIPA3F8WFD2 350 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 CTSSP25774 331 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 MALLQ13021 153 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 MFAP5Q13361 173 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 CARD17Q5XLA6 110 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 SLC25A47Q6Q0C1 308 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 UBE2J1Q9Y385 318 aaPredicted RBP11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 B3GALT1Q9Y5Z6 326 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 DKK1O94907 266 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 BMP5P22003 454 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 MTCP1P56278 107 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 PAFAH1B2P68402 229 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 C16orf47Q6ZP98 133 aaPredicted RBP11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 LHFPL2Q6ZUX7 228 aa11.57□□□□□ -0.56
SYNGAP1-204ENST00000449372 TRAV30A0A087WSZ9 112 aa11.56□□□□□ -0.56
SYNGAP1-204ENST00000449372 AQP7P3A6NL99 342 aa11.56□□□□□ -0.56
SYNGAP1-204ENST00000449372 ZXDAP98168 799 aa11.56□□□□□ -0.56
SYNGAP1-204ENST00000449372 MYBPHQ13203 477 aa11.56□□□□□ -0.56
SYNGAP1-204ENST00000449372 ZNF787Q6DD87 383 aa11.56□□□□□ -0.56
SYNGAP1-204ENST00000449372 LCN15Q6UWW0 184 aa11.56□□□□□ -0.56
SYNGAP1-204ENST00000449372 SMIM12Q96EX1 92 aa11.56□□□□□ -0.56
SYNGAP1-204ENST00000449372 P2RX4Q99571 388 aa11.56□□□□□ -0.56
SYNGAP1-204ENST00000449372 DUXBA0A1W2PPF3 345 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms