RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 GINS4Q9BRT9 223 aa15.86■□□□□ 0.13
RPS28-202ENST00000449223 OR1A1Q9P1Q5 309 aa15.86■□□□□ 0.13
RPS28-202ENST00000449223 MAP1AP78559 2803 aaPredicted RBP15.85■□□□□ 0.13
RPS28-202ENST00000449223 LOC105371242A0A075B767 164 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 PPIAL4CA0A0B4J2A2 164 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 OR5H14A6NHG9 310 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 C17orf98A8MV24 154 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 PHF1O43189 567 aaPredicted RBP15.85■□□□□ 0.13
RPS28-202ENST00000449223 YPEL1O60688 119 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 PPYP01298 95 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 LIPFP07098 398 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 PPIAL4GP0DN37 164 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 MECP2P51608 486 aaKnown RBP15.85■□□□□ 0.13
RPS28-202ENST00000449223 UCP3P55916 312 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 Q5PR19 223 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 ZDHHC22Q8N966 263 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 RFESDQ8TAC1 157 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 YPEL2Q96QA6 119 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 C20orf85Q9H1P6 137 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 IDI2-AS1Q9NZ38 188 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 OR2W1Q9Y3N9 320 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 ABCA2Q9BZC7 2435 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 CSMD1Q96PZ7 3565 aa15.85■□□□□ 0.13
RPS28-202ENST00000449223 MEX3AA1L020 520 aaKnown RBP15.84■□□□□ 0.13
RPS28-202ENST00000449223 HSPA12AO43301 675 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 FOXH1O75593 365 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 CCL3L1P16619 93 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 NFYAP23511 347 aaPredicted RBP15.84■□□□□ 0.13
RPS28-202ENST00000449223 ZFP36P26651 326 aaKnown RBP15.84■□□□□ 0.13
RPS28-202ENST00000449223 Q3ZCU0 254 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 GLCCI1Q86VQ1 547 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 UBALD1Q8TB05 177 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 C1orf159Q96HA4 380 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 OR2S2Q9NQN1 319 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 NUDT15Q9NV35 164 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 ITGB1BP1O14713 200 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 USF1P22415 310 aaPredicted RBP15.84■□□□□ 0.13
RPS28-202ENST00000449223 AADACP22760 399 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 CEACAM6P40199 344 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 Q6ZNX1 250 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 KIR3DL3Q8N743 410 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 SCGB3A2Q96PL1 93 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 TMPRSS13Q9BYE2 586 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 FXYD6Q9H0Q3 95 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 MMP28Q9H239 520 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 GFOD1Q9NXC2 390 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 RDH8Q9NYR8 311 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 ZNF69Q9UC07 566 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 GPR132Q9UNW8 380 aa15.84■□□□□ 0.13
RPS28-202ENST00000449223 YLPM1P49750 1951 aaKnown RBP15.83■□□□□ 0.12
RPS28-202ENST00000449223 PRRC2AP48634 2157 aaKnown RBP15.83■□□□□ 0.12
RPS28-202ENST00000449223 A0A087X0M5 115 aa15.83■□□□□ 0.12
RPS28-202ENST00000449223 A0A1B0GX30 115 aa15.83■□□□□ 0.12
RPS28-202ENST00000449223 OMGP23515 440 aa15.83■□□□□ 0.12
RPS28-202ENST00000449223 GNMTQ14749 295 aa15.83■□□□□ 0.12
RPS28-202ENST00000449223 MORN2Q502X0 79 aa15.83■□□□□ 0.12
RPS28-202ENST00000449223 C1orf122Q6ZSJ8 110 aa15.83■□□□□ 0.12
RPS28-202ENST00000449223 OR52L2PQ8NGH6 319 aa15.83■□□□□ 0.12
RPS28-202ENST00000449223 FOXC2Q99958 501 aa15.83■□□□□ 0.12
RPS28-202ENST00000449223 M0R1W7 72 aa15.82■□□□□ 0.12
RPS28-202ENST00000449223 ENSAO43768 121 aaKnown RBP15.82■□□□□ 0.12
RPS28-202ENST00000449223 MMP23AO75900 390 aa15.82■□□□□ 0.12
RPS28-202ENST00000449223 RGS11O94810 467 aa15.82■□□□□ 0.12
RPS28-202ENST00000449223 HERV-K104P61576 105 aa15.82■□□□□ 0.12
RPS28-202ENST00000449223 LOXL1Q08397 574 aaPredicted RBP15.82■□□□□ 0.12
RPS28-202ENST00000449223 EDARADDQ8WWZ3 215 aa15.82■□□□□ 0.12
RPS28-202ENST00000449223 ALX4Q9H161 411 aaPredicted RBP15.82■□□□□ 0.12
RPS28-202ENST00000449223 GNG12Q9UBI6 72 aa15.82■□□□□ 0.12
RPS28-202ENST00000449223 VSIG4Q9Y279 399 aa15.82■□□□□ 0.12
RPS28-202ENST00000449223 IGHV2-70DA0A0C4DH43 119 aa15.81■□□□□ 0.12
RPS28-202ENST00000449223 FAM157AC9JC47 383 aa15.81■□□□□ 0.12
RPS28-202ENST00000449223 IGHV1-8P0DP01 117 aa15.81■□□□□ 0.12
RPS28-202ENST00000449223 PPP1CCP36873 323 aaKnown RBP15.81■□□□□ 0.12
RPS28-202ENST00000449223 PRAMEF5Q5TYX0 476 aa15.81■□□□□ 0.12
RPS28-202ENST00000449223 LPCAT3Q6P1A2 487 aa15.81■□□□□ 0.12
RPS28-202ENST00000449223 LDLRAD3Q86YD5 345 aa15.81■□□□□ 0.12
RPS28-202ENST00000449223 C8orf31Q8N9H6 132 aa15.81■□□□□ 0.12
RPS28-202ENST00000449223 MARCH1Q8TCQ1 289 aa15.81■□□□□ 0.12
RPS28-202ENST00000449223 ZNF486Q96H40 463 aaPredicted RBP15.81■□□□□ 0.12
RPS28-202ENST00000449223 AGMATQ9BSE5 352 aa15.81■□□□□ 0.12
RPS28-202ENST00000449223 UNKLQ9H9P5 680 aaKnown RBP15.81■□□□□ 0.12
RPS28-202ENST00000449223 ARHGAP32A7KAX9 2087 aa15.81■□□□□ 0.12
RPS28-202ENST00000449223 IGKV1D-13A0A0B4J2D9 117 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 hCG_1809904A0A1W2PP81 198 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 A0A1W2PPE2 198 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 A0A1W2PR64 198 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 A0A1W2PRV1 198 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 FAM172BPA6NC97 362 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 INMT-MINDY4F8WBC2 141 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 PEX14O75381 377 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 H2AFB2P0C5Z0 115 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 IGKV1-13P0DP09 117 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 CD34P28906 385 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 MSMO1Q15800 293 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 SLC38A6Q8IZM9 456 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 ZNF439Q8NDP4 499 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 OR10V1Q8NGI7 309 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 RSRP1Q9BUV0 290 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 PARP12Q9H0J9 701 aaKnown RBP15.8■□□□□ 0.12
RPS28-202ENST00000449223 C5orf66Q9H5L9 145 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms