RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 PPIAL4AQ9Y536 164 aa11.93□□□□□ -0.5
VPS52-212ENST00000445902 CLEC18AA5D8T8 446 aa11.93□□□□□ -0.5
VPS52-212ENST00000445902 DHHO43323 396 aa11.93□□□□□ -0.5
VPS52-212ENST00000445902 TCF21O43680 179 aa11.93□□□□□ -0.5
VPS52-212ENST00000445902 PGLYRP1O75594 196 aaPredicted RBP11.93□□□□□ -0.5
VPS52-212ENST00000445902 SERPINE2P07093 398 aa11.93□□□□□ -0.5
VPS52-212ENST00000445902 CLEC18CQ8NCF0 446 aa11.93□□□□□ -0.5
VPS52-212ENST00000445902 ULBP2Q9BZM5 246 aa11.93□□□□□ -0.5
VPS52-212ENST00000445902 TP53I11O14683 189 aa11.92□□□□□ -0.5
VPS52-212ENST00000445902 ZNF16P17020 682 aaPredicted RBP11.92□□□□□ -0.5
VPS52-212ENST00000445902 PTGDSP41222 190 aa11.92□□□□□ -0.5
VPS52-212ENST00000445902 PMP22Q01453 160 aa11.92□□□□□ -0.5
VPS52-212ENST00000445902 RASL10BQ96S79 203 aa11.92□□□□□ -0.5
VPS52-212ENST00000445902 IGKV1-6A0A0C4DH72 117 aa11.92□□□□□ -0.5
VPS52-212ENST00000445902 PGPEP1LA6NFU8 196 aa11.92□□□□□ -0.5
VPS52-212ENST00000445902 NPIPA2E9PIF3 369 aa11.92□□□□□ -0.5
VPS52-212ENST00000445902 NPIPA3F8WFD2 350 aa11.92□□□□□ -0.5
VPS52-212ENST00000445902 TOX3O15405 576 aaPredicted RBP11.92□□□□□ -0.5
VPS52-212ENST00000445902 PDGFBP01127 241 aaPredicted RBP11.92□□□□□ -0.5
VPS52-212ENST00000445902 PSMB3P49720 205 aa11.92□□□□□ -0.5
VPS52-212ENST00000445902 GNG10P50151 68 aa11.92□□□□□ -0.5
VPS52-212ENST00000445902 PRR18Q8N4B5 295 aa11.92□□□□□ -0.5
VPS52-212ENST00000445902 OR5D13Q8NGL4 314 aa11.92□□□□□ -0.5
VPS52-212ENST00000445902 A0A1B0GX78 115 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 KIAA1324LA8MWY0 1029 aaPredicted RBP11.91□□□□□ -0.5
VPS52-212ENST00000445902 SYNGR2O43760 224 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 TRAPPC6AO75865 159 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 BRS3P32247 399 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 LRRC75BQ2VPJ9 315 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 C10orf35Q96D05 121 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 MANBALQ9NQG1 85 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 PLSCR2Q9NRY7 297 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 FRYLO94915 3013 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 GGCTO75223 188 aaKnown RBP11.91□□□□□ -0.5
VPS52-212ENST00000445902 CRYAAP02489 173 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 BCL3P20749 454 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 CDKN1AP38936 164 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 OR8B8Q15620 311 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 KIAA0895LQ68EN5 471 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 ACSM6Q6P461 480 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 CISD2Q8N5K1 135 aaKnown RBP11.91□□□□□ -0.5
VPS52-212ENST00000445902 ADPRHL1Q8NDY3 354 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 OR2M3Q8NG83 312 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 ZCCHC14Q8WYQ9 949 aaKnown RBP11.91□□□□□ -0.5
VPS52-212ENST00000445902 RAB40CQ96S21 281 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 AGMATQ9BSE5 352 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 WDR61Q9GZS3 305 aaKnown RBP11.91□□□□□ -0.5
VPS52-212ENST00000445902 RIMS4Q9H426 269 aaPredicted RBP11.91□□□□□ -0.5
VPS52-212ENST00000445902 LILRA5A6NI73 299 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 C5orf67F2Z3F1 127 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 G3V3Y1 287 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 H0Y980 276 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 PAGE4O60829 102 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 B4GALT1P15291 398 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 F2RP25116 425 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 UBALD1Q8TB05 177 aa11.91□□□□□ -0.5
VPS52-212ENST00000445902 FRYQ5TBA9 3013 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 HIST1H3AP68431 136 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 ASCL4Q6XD76 172 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 ANKRD37Q7Z713 158 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 VN1R17PQ8TDU5 208 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 IL1F10Q8WWZ1 152 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 PSMG3Q9BT73 122 aaPredicted RBP11.9□□□□□ -0.5
VPS52-212ENST00000445902 OR2J1Q9GZK6 312 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 PATZ1Q9HBE1 687 aaKnown RBP11.9□□□□□ -0.5
VPS52-212ENST00000445902 MSL2Q9HCI7 577 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 RNF150Q9ULK6 438 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 CELSR3Q9NYQ7 3312 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 ZNF816-ZNF321PA0A0X1KG74 233 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 CD300LBA8K4G0 201 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 M0QZK8 103 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 SIAH2O43255 324 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 HNF1AP20823 631 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 HNRNPKP61978 463 aaKnown RBP eCLIP11.9□□□□□ -0.54e-9■■□□□ 12.6
VPS52-212ENST00000445902 CFHR1Q03591 330 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 HLA-BQ31612 363 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 KCNIP4Q6PIL6 250 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 Q6ZWC4 215 aa11.9□□□□□ -0.5
VPS52-212ENST00000445902 TAF15Q92804 592 aaKnown RBP eCLIP11.9□□□□□ -0.5
VPS52-212ENST00000445902 TRAV39A0A0B4J263 110 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 CRYGSP22914 178 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 SERF2P84101 59 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 SLC25A53Q5H9E4 307 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 Q6ZSR3 168 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 CENPVQ7Z7K6 275 aaPredicted RBP11.89□□□□□ -0.51
VPS52-212ENST00000445902 CMTM2Q8TAZ6 248 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 IMMP2LQ96T52 175 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 ADMP35318 185 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 HBG1P69891 147 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 HBG2P69892 147 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 GAGE1Q13065 139 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 C10orf128Q5T292 105 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 NFAM1Q8NET5 270 aaPredicted RBP11.89□□□□□ -0.51
VPS52-212ENST00000445902 ANAPC16Q96DE5 110 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 ALKBH3Q96Q83 286 aaPredicted RBP11.89□□□□□ -0.51
VPS52-212ENST00000445902 DERL1Q9BUN8 251 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 FGF21Q9NSA1 209 aa11.89□□□□□ -0.51
VPS52-212ENST00000445902 ERRFI1Q9UJM3 462 aaPredicted RBP11.89□□□□□ -0.51
VPS52-212ENST00000445902 DUXBA0A1W2PPF3 345 aa11.88□□□□□ -0.51
VPS52-212ENST00000445902 SYNGR3O43761 229 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms