RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	ZFP62	Q8NB50	900 aa	Predicted RBP	5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	CHST8	Q9H2A9	424 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	CALHM2	Q9HA72	323 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	PIGV	Q9NUD9	493 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	PRR13	Q9NZ81	148 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	TAAR3P	Q9P1P4	343 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	MARCH4	Q9P2E8	410 aa	Predicted RBP	5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	TP53TG3	Q9ULZ0	132 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329		V9GY05	133 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	MYLK	Q15746	1914 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	MYO9B	Q13459	2157 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329		A0A1W2PQM1	296 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	TMEM189	A5PLL7	270 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	C21orf140	B9A014	251 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	TNFRSF10C	O14798	259 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	KIR2DS4	P43632	304 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	NKX2-1	P43699	371 aa	Predicted RBP	5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	FXYD6P3	P58550	94 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	RTP5	Q14D33	572 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	RNASEK	Q6P5S7	137 aa	Known RBP	5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	ZNF474	Q6S9Z5	364 aa	Predicted RBP	5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	SIGLEC15	Q6ZMC9	328 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	ADAMTSL5	Q6ZMM2	481 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	FOXI2	Q6ZQN5	318 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	TMEM116	Q8NCL8	245 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	OR10AG1	Q8NH19	301 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	PLPPR1	Q8TBJ4	325 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	VSTM2L	Q96N03	204 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	SPON2	Q9BUD6	331 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	WDR61	Q9GZS3	305 aa	Known RBP	5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	ST20	Q9HBF5	79 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	ZNF835	Q9Y2P0	537 aa		5.85	□□□□□ -1.47
TRIM6-205	ENST00000445329	TRAV8-7	A0A075B6U6	113 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	FAM90A27P	A6NNH2	459 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	KIR2DS3	K7RE56	304 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	MT-ATP8	P03928	68 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	NGFR	P08138	427 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	MRPL3	P09001	348 aa	Known RBP	5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	COX7A2	P14406	83 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	PMCH	P20382	165 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	RPL8	P62917	257 aa	Known RBP	5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	POU3F1	Q03052	451 aa	Predicted RBP	5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	KIR2DS3	Q14952	304 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	TMEM215	Q68D42	235 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	PLXDC2	Q6UX71	529 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	ZNF841	Q6ZN19	808 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329		Q6ZNB5	142 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329		Q6ZSR6	202 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	DTX1	Q86Y01	620 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	SYT12	Q8IV01	421 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	ARHGEF39	Q8N4T4	335 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	LRRC75A	Q8NAA5	344 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	SCCPDH	Q8NBX0	429 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	OR5D13	Q8NGL4	314 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	SKA2	Q8WVK7	121 aa	Predicted RBP	5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	DDB2	Q92466	427 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	TIMP4	Q99727	224 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	MAP1LC3C	Q9BXW4	147 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	NKX2-4	Q9H2Z4	354 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	HS3ST2	Q9Y278	367 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	NUP210L	Q5VU65	1888 aa		5.84	□□□□□ -1.47
TRIM6-205	ENST00000445329	TRAV9-2	A0A087WT02	112 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	FEZF1	A0PJY2	475 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	ISLR	O14498	428 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	LAT	O43561	262 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	TYMS	P04818	313 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	RHOC	P08134	193 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	IGLL1	P15814	213 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	CRISP2	P16562	243 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	CR2	P20023	1033 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	HIST1H1T	P22492	207 aa	Predicted RBP	5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	SLC16A1	P53985	500 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	RPS15A	P62244	130 aa	Known RBP	5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	TIAL1	Q01085	375 aa	Known RBP eCLIP	5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	WIPI1	Q5MNZ9	446 aa	Predicted RBP	5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	COX20	Q5RI15	118 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	DMKN	Q6E0U4	476 aa	Predicted RBP	5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	SLC35F2	Q8IXU6	374 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	OR2M3	Q8NG83	312 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	C16orf52	Q8NHV5	167 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	LRRC3B	Q96PB8	259 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	AMELY	Q99218	206 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	FAM124B	Q9H5Z6	455 aa	Predicted RBP	5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	PXMP4	Q9Y6I8	212 aa		5.84	□□□□□ -1.48
TRIM6-205	ENST00000445329	EPOP	A6NHQ4	379 aa		5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	C9orf118	A6NHY6	69 aa		5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	UPK3BL1	B0FP48	263 aa		5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	UPK3BL2	E5RIL1	263 aa		5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329		H7C1C5	153 aa		5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	TMPRSS2	O15393	492 aa		5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	C3orf79	P0CE67	100 aa		5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	ZNF728	P0DKX0	622 aa		5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	IL3RA	P26951	378 aa		5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	THBS3	P49746	956 aa		5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	RPL15	P61313	204 aa	Known RBP	5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	GRB2	P62993	217 aa	Known RBP	5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	KCNIP4	Q6PIL6	250 aa		5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	SGPP2	Q8IWX5	399 aa		5.83	□□□□□ -1.48
TRIM6-205	ENST00000445329	TEX26	Q8N6G2	289 aa		5.83	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms