RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 SOSTQ9BQB4 213 aa12.79□□□□□ -0.36
PCNX1-202ENST00000439984 TRAV38-1A0A0B4J264 116 aa12.79□□□□□ -0.36
PCNX1-202ENST00000439984 FKBP2P26885 142 aaKnown RBP12.79□□□□□ -0.36
PCNX1-202ENST00000439984 UNQ9370/PRO34162Q6UXP9 181 aa12.79□□□□□ -0.36
PCNX1-202ENST00000439984 ZNF519Q8TB69 540 aa12.79□□□□□ -0.36
PCNX1-202ENST00000439984 TUBA4BQ9H853 241 aa12.79□□□□□ -0.36
PCNX1-202ENST00000439984 LOC107984156A0A0G2JMH3 177 aa12.79□□□□□ -0.36
PCNX1-202ENST00000439984 LINC01387J3KSC0 135 aa12.79□□□□□ -0.36
PCNX1-202ENST00000439984 DNLZQ5SXM8 178 aa12.79□□□□□ -0.36
PCNX1-202ENST00000439984 ARL17AQ8IVW1 177 aa12.79□□□□□ -0.36
PCNX1-202ENST00000439984 GAL3ST2Q9H3Q3 398 aa12.79□□□□□ -0.36
PCNX1-202ENST00000439984 DYNLRB1Q9NP97 96 aa12.79□□□□□ -0.36
PCNX1-202ENST00000439984 LAMTOR2Q9Y2Q5 125 aa12.79□□□□□ -0.36
PCNX1-202ENST00000439984 MARCH11A6NNE9 402 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 EPHA8P29322 1005 aaPredicted RBP12.78□□□□□ -0.36
PCNX1-202ENST00000439984 CRYBA2P53672 197 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 ZNF506Q5JVG8 444 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 PEF1Q9UBV8 284 aaKnown RBP12.78□□□□□ -0.36
PCNX1-202ENST00000439984 NDUFA2O43678 99 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 LEPROTL1O95214 131 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 FCGR3AP08637 254 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 FBLN7Q53RD9 439 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 RTL10Q7L3V2 364 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 HIST3H2BBQ8N257 126 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 COL8A1P27658 744 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 MRGPRDQ8TDS7 321 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 MENTQ9BUN1 341 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 HDGFL3Q9Y3E1 203 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 TBL2Q9Y4P3 447 aaKnown RBP12.78□□□□□ -0.36
PCNX1-202ENST00000439984 AUP1Q9Y679 476 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 NUDT3O95989 172 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 JOSD1Q15040 202 aaPredicted RBP12.78□□□□□ -0.36
PCNX1-202ENST00000439984 UTP23Q9BRU9 249 aaKnown RBP12.78□□□□□ -0.36
PCNX1-202ENST00000439984 ZNF430Q9H8G1 570 aaPredicted RBP12.78□□□□□ -0.36
PCNX1-202ENST00000439984 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 RBP4P02753 201 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 ARR3P36575 388 aa12.78□□□□□ -0.36
PCNX1-202ENST00000439984 EIF4EBP2Q13542 120 aaPredicted RBP12.78□□□□□ -0.36
PCNX1-202ENST00000439984 MRPL37Q9BZE1 423 aaKnown RBP12.78□□□□□ -0.36
PCNX1-202ENST00000439984 PARP14Q460N5 1801 aa12.77□□□□□ -0.36
PCNX1-202ENST00000439984 TRBV5-7A0A0A0MS05 114 aa12.77□□□□□ -0.36
PCNX1-202ENST00000439984 CYC1P08574 325 aa12.77□□□□□ -0.36
PCNX1-202ENST00000439984 SFTPCP11686 197 aa12.77□□□□□ -0.36
PCNX1-202ENST00000439984 RPS19BP1Q86WX3 136 aaKnown RBP12.77□□□□□ -0.36
PCNX1-202ENST00000439984 NKX6-3A6NJ46 265 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 SLC22A20A6NK97 555 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 PDPNQ86YL7 162 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 DERL1Q9BUN8 251 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 FOLR2P14207 255 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 CEBPDP49716 269 aaPredicted RBP12.77□□□□□ -0.37
PCNX1-202ENST00000439984 HEPN1Q6WQI6 88 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 OR1B1Q8NGR6 318 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 R3HDM4Q96D70 268 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 NUDT11Q96G61 164 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 IL36RNQ9UBH0 155 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 OR4A8P0C604 315 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 GNG3P63215 75 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 MUCL1Q96DR8 90 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 ADTRPQ96IZ2 230 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 SAP30LQ9HAJ7 183 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 ASCL3Q9NQ33 180 aa12.77□□□□□ -0.37
PCNX1-202ENST00000439984 ALG1L2C9J202 215 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 MT-ND6P03923 174 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 MMDQ15546 238 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 LY6G6FQ5SQ64 297 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 IBA57Q5T440 356 aaKnown RBP12.76□□□□□ -0.37
PCNX1-202ENST00000439984 KBTBD11O94819 623 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 ISXQ2M1V0 245 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 SPRED2Q7Z698 418 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 LHX9Q9NQ69 397 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 CXCL1P09341 107 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 IZUMO4Q1ZYL8 232 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 APOBEC3DQ96AK3 386 aaPredicted RBP12.76□□□□□ -0.37
PCNX1-202ENST00000439984 MEGF9Q9H1U4 602 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 OTOFQ9HC10 1997 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 TNFRSF4P43489 277 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 PARM1Q6UWI2 310 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 TMEM230Q96A57 120 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 IGHEP01854 428 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 IL3RAP26951 378 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 AP5S1Q9NUS5 200 aa12.76□□□□□ -0.37
PCNX1-202ENST00000439984 PQLC2Q6ZP29 291 aa12.75□□□□□ -0.37
PCNX1-202ENST00000439984 OR1N1Q8NGS0 311 aa12.75□□□□□ -0.37
PCNX1-202ENST00000439984 TAF15Q92804 592 aaKnown RBP eCLIP12.75□□□□□ -0.37
PCNX1-202ENST00000439984 SELENOKQ9Y6D0 94 aa12.75□□□□□ -0.37
PCNX1-202ENST00000439984 ZNF646O15015 1829 aaPredicted RBP12.75□□□□□ -0.37
PCNX1-202ENST00000439984 TTC32Q5I0X7 151 aa12.75□□□□□ -0.37
PCNX1-202ENST00000439984 FAM19A2Q8N3H0 131 aa12.75□□□□□ -0.37
PCNX1-202ENST00000439984 SFRP2Q96HF1 295 aa12.75□□□□□ -0.37
PCNX1-202ENST00000439984 TMSB15BA0A087X1C1 80 aa12.75□□□□□ -0.37
PCNX1-202ENST00000439984 FSTP19883 344 aa12.75□□□□□ -0.37
PCNX1-202ENST00000439984 BTF3P20290 206 aaKnown RBP12.75□□□□□ -0.37
PCNX1-202ENST00000439984 PPP1CAP62136 330 aa12.75□□□□□ -0.37
PCNX1-202ENST00000439984 LYG1Q8N1E2 194 aa12.75□□□□□ -0.37
PCNX1-202ENST00000439984 OR8B2Q96RD0 313 aa12.75□□□□□ -0.37
PCNX1-202ENST00000439984 NUDT16L1Q9BRJ7 211 aaKnown RBP12.75□□□□□ -0.37
PCNX1-202ENST00000439984 ZNF764Q96H86 408 aaPredicted RBP12.75□□□□□ -0.37
PCNX1-202ENST00000439984 TMEM222Q9H0R3 208 aa12.75□□□□□ -0.37
PCNX1-202ENST00000439984 YBX2Q9Y2T7 364 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms