RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 NAT8LQ8N9F0 302 aa3.01□□□□□ -1.93
TOP2A-201ENST00000423485 ZNF511Q8NB15 262 aa3.01□□□□□ -1.93
TOP2A-201ENST00000423485 SRD5A3Q9H8P0 318 aa3.01□□□□□ -1.93
TOP2A-201ENST00000423485 RPH3ALQ9UNE2 315 aa3.01□□□□□ -1.93
TOP2A-201ENST00000423485 EXOGQ9Y2C4 368 aaKnown RBP3.01□□□□□ -1.93
TOP2A-201ENST00000423485 TMA7Q9Y2S6 64 aaKnown RBP3.01□□□□□ -1.93
TOP2A-201ENST00000423485 IGHV3OR15-7A0A075B7D8 119 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 IGHV4-30-2A0A087WSY4 118 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 A0A087WX48 190 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 NAP1L6A6NFF2 107 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 NPIPB8E9PQR5 432 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 UPK1AO00322 258 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 OGG1O15527 345 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 IL6RP08887 468 aaPredicted RBP3□□□□□ -1.93
TOP2A-201ENST00000423485 BDKRB2P30411 391 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 OPRK1P41145 380 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 UBE2NLQ5JXB2 153 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 ABLIM2Q6H8Q1 611 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 ETV3LQ6ZN32 361 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 Q6ZRG5 221 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 MOB1BQ7L9L4 216 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 TMEM99Q8N816 258 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 ACBD4Q8NC06 268 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 TSKUQ8WUA8 353 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 COQ10BQ9H8M1 238 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 TPT1P8Q9HAU6 139 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 NAGKQ9UJ70 344 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 FOXA2Q9Y261 457 aaPredicted RBP3□□□□□ -1.93
TOP2A-201ENST00000423485 STAB1Q9NY15 2570 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 DOCK11Q5JSL3 2073 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 K7N7A8 449 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 TSPAN2O60636 221 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 B3GALNT1O75752 331 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 CST2P09228 141 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 RBMY1CP0DJD4 496 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 IMPA1P29218 277 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 RPL22L1Q6P5R6 122 aaKnown RBP3□□□□□ -1.93
TOP2A-201ENST00000423485 CFAP161Q6P656 301 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 DRAM2Q6UX65 266 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 ZNF367Q7RTV3 350 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 TMEM150AQ86TG1 271 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 LILRB2Q8N423 598 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 GCSAMQ8N6F7 178 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 TMEM104Q8NE00 496 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 OR1S2Q8NGQ3 325 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 TMEM167AQ8TBQ9 72 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 MRGPRDQ8TDS7 321 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 RNF128Q8TEB7 428 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 RNF122Q9H9V4 155 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 GCM1Q9NP62 436 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 HHLA2Q9UM44 414 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 ALG5Q9Y673 324 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 BMPR1BO00238 502 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 GPRIN2O60269 458 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 AMBPP02760 352 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 GKN3PP0CG01 181 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 AREGP15514 252 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 FASP25445 335 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 SULT1A2P50226 295 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 SRSF1Q07955 248 aaKnown RBP eCLIP3□□□□□ -1.933e-6■■□□□ 12.5
TOP2A-201ENST00000423485 GAGE1Q13065 139 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 OR1Q1Q15612 314 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 SSX1Q16384 188 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 MEDAGQ5VYS4 303 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 TSPYL5Q86VY4 417 aaPredicted RBP3□□□□□ -1.93
TOP2A-201ENST00000423485 TERB2Q8NHR7 220 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 SECTM1Q8WVN6 248 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 MEGF10Q96KG7 1140 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 TBX5Q99593 518 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 SLC29A1Q99808 456 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 WFDC1Q9HC57 220 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 AMBNQ9NP70 447 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 METTL1Q9UBP6 276 aaKnown RBP3□□□□□ -1.93
TOP2A-201ENST00000423485 ADAMTS9Q9P2N4 1935 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 A0A1B0GTI1 187 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 A0A1B0GU03 582 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 J3QLW9 94 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 TIAF1O95411 115 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 SCGB1D2O95969 90 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 ZNF19P17023 458 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 NPPCP23582 126 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 PSMA1P25786 263 aaKnown RBP3□□□□□ -1.93
TOP2A-201ENST00000423485 MAS1LP35410 378 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 AQP2P41181 271 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 GPM6AP51674 278 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 WNT3P56703 355 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 TAS2R39P59534 338 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 MRPS10P82664 201 aaKnown RBP3□□□□□ -1.93
TOP2A-201ENST00000423485 SSBP1Q04837 148 aaKnown RBP3□□□□□ -1.93
TOP2A-201ENST00000423485 EBPQ15125 230 aaKnown RBP3□□□□□ -1.93
TOP2A-201ENST00000423485 MRPL2Q5T653 305 aaKnown RBP3□□□□□ -1.93
TOP2A-201ENST00000423485 SLC22A24Q8N4F4 322 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 OR8J3Q8NGG0 315 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 UBALD1Q8TB05 177 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 DYNC2LI1Q8TCX1 351 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 RBM4BQ9BQ04 359 aaKnown RBP3□□□□□ -1.93
TOP2A-201ENST00000423485 OR51E2Q9H255 320 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 PLEKHF2Q9H8W4 249 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 PLSCR4Q9NRQ2 329 aa3□□□□□ -1.93
TOP2A-201ENST00000423485 MRPL15Q9P015 296 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms