RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 CCL1P22362 96 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 CD300CQ08708 224 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 C11orf87Q6NUJ2 197 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 LIAT1Q6ZQX7 453 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 RNF141Q8WVD5 230 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 MRGPRFQ96AM1 343 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 PLSCR3Q9NRY6 295 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 TMEM106BQ9NUM4 274 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 INSIG2Q9Y5U4 225 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 JTBO76095 146 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 VDAC1P21796 283 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 RAB13P51153 203 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 PLAC9Q5JTB6 97 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 SEZ6L2Q6UXD5 910 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 TCTE3Q8IZS6 198 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 OR5M8Q8NGP6 311 aa7.74□□□□□ -1.17
LIG4-202ENST00000405925 MARS2Q96GW9 593 aaKnown RBP7.74□□□□□ -1.17
LIG4-202ENST00000405925 PNRC2Q9NPJ4 139 aaKnown RBP7.74□□□□□ -1.17
LIG4-202ENST00000405925 NDUFA2O43678 99 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 CA7P43166 264 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 POLR2GP62487 172 aaKnown RBP eCLIP7.73□□□□□ -1.17
LIG4-202ENST00000405925 CST9LP1Q5W188 147 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 IGF2-ASQ6U949 168 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 LRP11Q86VZ4 500 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 THNSL2Q86YJ6 484 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 FAM219AQ8IW50 185 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 ST6GALNAC3Q8NDV1 305 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 WFIKKN1Q96NZ8 548 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 GPHA2Q96T91 129 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 CALYQ9NYX4 217 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 TUBD1Q9UJT1 453 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 SLC25A15Q9Y619 301 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 DKK1O94907 266 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 TAS2R30P59541 319 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 ASPHD2Q6ICH7 369 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 LYZL2Q7Z4W2 148 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 FAM216BQ8N7L0 139 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 R3HDM4Q96D70 268 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 UNKLQ9H9P5 680 aaKnown RBP7.73□□□□□ -1.17
LIG4-202ENST00000405925 PIPOXQ9P0Z9 390 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 LPAR3Q9UBY5 353 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 TMEM8BA6NDV4 472 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 IFNL4K9M1U5 179 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 MPC2O95563 127 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 F2RP25116 425 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 SSTR5P35346 364 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 SRP14P37108 136 aaKnown RBP7.73□□□□□ -1.17
LIG4-202ENST00000405925 CDKN1AP38936 164 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 ACP7Q6ZNF0 438 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 AKR1E2Q96JD6 320 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 ABHD14AQ9BUJ0 271 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 KCNIP2Q9NS61 270 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 PRR14LQ5THK1 2151 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 BRCA2P51587 3418 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 PQLC2LA1A4F0 135 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 TMEM50BP56557 158 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 ARF6P62330 175 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 ZNF674Q2M3X9 581 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 TMEM182Q6ZP80 229 aaPredicted RBP7.73□□□□□ -1.17
LIG4-202ENST00000405925 Q6ZRG5 221 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 OR13D1Q8NGV5 346 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 SFT2D1Q8WV19 159 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 LEAP2Q969E1 77 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 GNB4Q9HAV0 340 aa7.73□□□□□ -1.17
LIG4-202ENST00000405925 MUC1P15941 1255 aaPredicted RBP7.72□□□□□ -1.17
LIG4-202ENST00000405925 TLE4Q04727 773 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 BAP18Q8IXM2 172 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 KCNRGQ8N5I3 272 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 POC1AQ8NBT0 407 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 ACY3Q96HD9 319 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 HARBI1Q96MB7 349 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 TMEM56Q96MV1 263 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 HSD17B10Q99714 261 aaKnown RBP7.72□□□□□ -1.17
LIG4-202ENST00000405925 GSX2Q9BZM3 304 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 TNFRSF19Q9NS68 423 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 ZFP92A6NM28 416 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 K7N7A8 449 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 TAAR5O14804 337 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 PSG2P11465 335 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 PPT1P50897 306 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 P2RX3P56373 397 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 S100A7AQ86SG5 101 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 GCSAMQ8N6F7 178 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 RELL2Q8NC24 303 aaPredicted RBP7.72□□□□□ -1.17
LIG4-202ENST00000405925 ASB13Q8WXK3 278 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 CNTNAP3Q9BZ76 1288 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 Q9N2K0 584 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 SIRT7Q9NRC8 400 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 CACFD1Q9UGQ2 172 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 IGHV3-72A0A0B4J1Y9 119 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 FAM24AA6NFZ4 105 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 METTL15P1P0C7V9 234 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 BRS3P32247 399 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 NTF4P34130 210 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 MITD1Q8WV92 249 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 DHRS9Q9BPW9 319 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 OR1A1Q9P1Q5 309 aa7.72□□□□□ -1.17
LIG4-202ENST00000405925 F2RL2O00254 374 aa7.71□□□□□ -1.17
LIG4-202ENST00000405925 ALX3O95076 343 aa7.71□□□□□ -1.17
LIG4-202ENST00000405925 HBE1P02100 147 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms