RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 THNSL2Q86YJ6 484 aa16.89■□□□□ 0.29
CCDC47-202ENST00000403162 MKXQ8IYA7 352 aa16.89■□□□□ 0.29
CCDC47-202ENST00000403162 NEK7Q8TDX7 302 aa16.89■□□□□ 0.29
CCDC47-202ENST00000403162 ABHD3Q8WU67 409 aa16.89■□□□□ 0.29
CCDC47-202ENST00000403162 OPA3Q9H6K4 179 aa16.89■□□□□ 0.29
CCDC47-202ENST00000403162 TMEM242Q9NWH2 141 aa16.89■□□□□ 0.29
CCDC47-202ENST00000403162 IL36RNQ9UBH0 155 aa16.89■□□□□ 0.29
CCDC47-202ENST00000403162 MRPS18CQ9Y3D5 142 aaKnown RBP16.89■□□□□ 0.29
CCDC47-202ENST00000403162 A0A0G2JRQ6 117 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 TRAPPC2LH3BP13 241 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 SLC33A1O00400 549 aaPredicted RBP16.88■□□□□ 0.29
CCDC47-202ENST00000403162 CYB5BO43169 146 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 PNRC1Q12796 327 aaPredicted RBP16.88■□□□□ 0.29
CCDC47-202ENST00000403162 DCAF10Q5QP82 559 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 FAM90A2PQ658T7 463 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 SPNS3Q6ZMD2 512 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 CISD1Q9NZ45 108 aaKnown RBP16.88■□□□□ 0.29
CCDC47-202ENST00000403162 CRIM1Q9NZV1 1036 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 ELOA3CA0A087WX78 387 aaPredicted RBP16.88■□□□□ 0.29
CCDC47-202ENST00000403162 TNFSF12O43508 249 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 CD200P41217 278 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 P4HA3Q7Z4N8 544 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 LINC00596Q86U02 117 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 MRPL30Q8TCC3 161 aaKnown RBP16.88■□□□□ 0.29
CCDC47-202ENST00000403162 GPR146Q96CH1 333 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 FAM122AQ96E09 287 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 THOC3Q96J01 351 aaKnown RBP16.88■□□□□ 0.29
CCDC47-202ENST00000403162 FREM2Q5SZK8 3169 aa16.88■□□□□ 0.29
CCDC47-202ENST00000403162 HSPB6O14558 160 aa16.87■□□□□ 0.29
CCDC47-202ENST00000403162 RND2P52198 227 aa16.87■□□□□ 0.29
CCDC47-202ENST00000403162 ZNF324BQ6AW86 544 aaPredicted RBP16.87■□□□□ 0.29
CCDC47-202ENST00000403162 FER1L6-AS2Q96M78 137 aa16.87■□□□□ 0.29
CCDC47-202ENST00000403162 PLK3Q9H4B4 646 aa16.87■□□□□ 0.29
CCDC47-202ENST00000403162 GNG13Q9P2W3 67 aa16.87■□□□□ 0.29
CCDC47-202ENST00000403162 OR2W1Q9Y3N9 320 aa16.87■□□□□ 0.29
CCDC47-202ENST00000403162 NKX2-8O15522 239 aa16.87■□□□□ 0.29
CCDC47-202ENST00000403162 BCL2P10415 239 aa16.87■□□□□ 0.29
CCDC47-202ENST00000403162 WT1P19544 449 aaPredicted RBP16.87■□□□□ 0.29
CCDC47-202ENST00000403162 SLC25A24Q6NUK1 477 aa16.87■□□□□ 0.29
CCDC47-202ENST00000403162 MRPL21Q7Z2W9 205 aaKnown RBP16.87■□□□□ 0.29
CCDC47-202ENST00000403162 LINC00470Q9BZP3 86 aa16.87■□□□□ 0.29
CCDC47-202ENST00000403162 RNF150Q9ULK6 438 aa16.87■□□□□ 0.29
CCDC47-202ENST00000403162 TGOLN2O43493 480 aa16.86■□□□□ 0.29
CCDC47-202ENST00000403162 TRAPPC6AO75865 159 aa16.86■□□□□ 0.29
CCDC47-202ENST00000403162 CNOT4O95628 575 aaKnown RBP16.86■□□□□ 0.29
CCDC47-202ENST00000403162 TRGC2P03986 189 aa16.86■□□□□ 0.29
CCDC47-202ENST00000403162 ACSF3Q4G176 576 aaPredicted RBP16.86■□□□□ 0.29
CCDC47-202ENST00000403162 MBD3L1Q8WWY6 194 aa16.86■□□□□ 0.29
CCDC47-202ENST00000403162 ZNF845Q96IR2 970 aaPredicted RBP16.86■□□□□ 0.29
CCDC47-202ENST00000403162 MSRB2Q9Y3D2 182 aa16.86■□□□□ 0.29
CCDC47-202ENST00000403162 IGKV3D-15A0A087WSY6 115 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 SERPINE2P07093 398 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 COX5BP10606 129 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 GFRA1P56159 465 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 RAB11AP62491 216 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 NKX6-1P78426 367 aaPredicted RBP16.85■□□□□ 0.29
CCDC47-202ENST00000403162 ARF1P84077 181 aaKnown RBP16.85■□□□□ 0.29
CCDC47-202ENST00000403162 TMEM267Q0VDI3 215 aaPredicted RBP16.85■□□□□ 0.29
CCDC47-202ENST00000403162 ZNF880Q6PDB4 577 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 C1orf87Q8N0U7 546 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 HIST3H2BBQ8N257 126 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 OR5A2Q8NGI9 324 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 PSMG3Q9BT73 122 aaPredicted RBP16.85■□□□□ 0.29
CCDC47-202ENST00000403162 CABLES2Q9BTV7 478 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 RPRMQ9NS64 109 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 NOSIPQ9Y314 301 aaKnown RBP16.85■□□□□ 0.29
CCDC47-202ENST00000403162 H3BP45 60 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 PPP1R2P9O14990 202 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 ATXN7O15265 892 aaPredicted RBP16.85■□□□□ 0.29
CCDC47-202ENST00000403162 SS18L1O75177 396 aaPredicted RBP16.85■□□□□ 0.29
CCDC47-202ENST00000403162 CYB5R3P00387 301 aaPredicted RBP16.85■□□□□ 0.29
CCDC47-202ENST00000403162 IGHV3-9P01782 118 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 DNLZQ5SXM8 178 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 C20orf204Q6ZNR8 217 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 LSM10Q969L4 123 aaKnown RBP16.85■□□□□ 0.29
CCDC47-202ENST00000403162 APOBEC3DQ96AK3 386 aaPredicted RBP16.85■□□□□ 0.29
CCDC47-202ENST00000403162 FAM210BQ96KR6 192 aa16.85■□□□□ 0.29
CCDC47-202ENST00000403162 LRP5LA4QPB2 252 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 ARGFXA6NJG6 315 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 MRPL33O75394 65 aaKnown RBP16.84■□□□□ 0.29
CCDC47-202ENST00000403162 PSG2P11465 335 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 CCNOP22674 350 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 ZNF787Q6DD87 383 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 OR10J5Q8NHC4 309 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 SCGB1C1Q8TD33 95 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 P2RX4Q99571 388 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 DEPPQ9NTK1 212 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 C5orf49A4QMS7 147 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 CLDN34H7C241 214 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 KLK10O43240 276 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 SYNGR1O43759 233 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 ZNF383Q8NA42 475 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 OR10D4PQ8NGN7 298 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 OR51H1Q8NH63 302 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 PSMF1Q92530 271 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 PFDN5Q99471 154 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 RSG1Q9BU20 258 aa16.84■□□□□ 0.29
CCDC47-202ENST00000403162 AKAP13Q12802 2813 aa16.83■□□□□ 0.29
CCDC47-202ENST00000403162 PIEZO1Q92508 2521 aa16.83■□□□□ 0.28
CCDC47-202ENST00000403162 SOD3P08294 240 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms