RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CALHM1Q8IU99 346 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 ZNF695Q8IW36 515 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 OR51G1Q8NGK1 321 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 OR5C1Q8NGR4 320 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 FGFBP3Q8TAT2 258 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 SLC7A10Q9NS82 523 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 COL6A3P12111 3177 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 ADAM20O43506 726 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 TNFSF13O75888 250 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 UMODP07911 640 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 GNRHRP30968 328 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 CDKN1BP46527 198 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 RBM11P57052 281 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 RAC1P63000 192 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 RUNX1Q01196 453 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 ZNF468Q5VIY5 522 aaPredicted RBP13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 MRPL14Q6P1L8 145 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 CPEB3Q8NE35 698 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 TMEM222Q9H0R3 208 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 Q9N2K0 584 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 GLRX2Q9NS18 164 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 TMEM38BQ9NVV0 291 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 FUT9Q9Y231 359 aa13.68□□□□□ -0.22
CHMP1A-201ENST00000397901 ZFP92A6NM28 416 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 ZNHIT1O43257 154 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 GALR1P47211 349 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 SOX8P57073 446 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 RANP62826 216 aaKnown RBP13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 PSG4Q00888 419 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 WDR5BQ86VZ2 330 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 C11orf42Q8N5U0 333 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 TMEM252Q8N6L7 170 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 RNASE8Q8TDE3 154 aaKnown RBP13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 GUCD1Q96NT3 240 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 MSL2Q9HCI7 577 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 PROB1E7EW31 1015 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 CDS2O95674 445 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 DYNLT3P51808 116 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 FUT6P51993 359 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 GNB2P62879 340 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 TMEM42Q69YG0 159 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 YRDCQ86U90 279 aaKnown RBP13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 NECAP1Q8NC96 275 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 GPR35Q9HC97 309 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 NAT8Q9UHE5 227 aa13.67□□□□□ -0.22
CHMP1A-201ENST00000397901 hCG_38984A0A1B0GV85 526 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 OR6C6A6NF89 314 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 RAB7AP51149 207 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 CNN1P51911 297 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 DAZAP2Q15038 168 aaPredicted RBP13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 BATFQ16520 125 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 MPV17LQ2QL34 196 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 TMEM211Q6ICI0 200 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 CENPVQ7Z7K6 275 aaPredicted RBP13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 ZNF611Q8N823 705 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 ZCCHC14Q8WYQ9 949 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 NAT6Q93015 286 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 MS4A10Q96PG2 267 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 PCGF1Q9BSM1 259 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 LYRM2Q9NU23 88 aaPredicted RBP13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 HSPB6O14558 160 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 ADIRFQ15847 76 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 LEMD1Q68G75 181 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 SELENOHQ8IZQ5 122 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 IL22RA1Q8N6P7 574 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 AGBL5Q8NDL9 886 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 IMMP2LQ96T52 175 aa13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 PTRH2Q9Y3E5 179 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-201ENST00000397901 IGHV1-45A0A0A0MS14 117 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 H7BYZ3 331 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 TMEM50AO95807 157 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 PDGFBP01127 241 aaPredicted RBP13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 SSR4P51571 173 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 TAS2R30P59541 319 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 ZNF818PQ6ZRF7 136 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 GAPTQ8N292 157 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 CISD2Q8N5K1 135 aaKnown RBP13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 MAFAQ8NHW3 353 aaPredicted RBP13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 EXTL1Q92935 676 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 PRSS50Q9UI38 385 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 C20orf202A1L168 122 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 IFNL4K9M1U5 179 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 HRASP01112 189 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 JMJD7P0C870 316 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 SELENOTP62341 195 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 SRPXP78539 464 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 IL24Q13007 206 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 OR8B8Q15620 311 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 CEACAM16Q2WEN9 425 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 ZNF787Q6DD87 383 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 AAED1Q7RTV5 226 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 AGMATQ9BSE5 352 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 ELOVL1Q9BW60 279 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 OR2H1Q9GZK4 316 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 IL36GQ9NZH8 169 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 OR6C3Q9NZP0 311 aa13.65□□□□□ -0.22
CHMP1A-201ENST00000397901 A0A0G2JMM0 328 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 A0A1W2PPB8 328 aa13.64□□□□□ -0.23
CHMP1A-201ENST00000397901 A0A1W2PRS3 328 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms