RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 GPN1Q9HCN4 374 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-205ENST00000397761 C19orf12Q9NSK7 152 aa16.1■□□□□ 0.17
PDLIM2-205ENST00000397761 RDH8Q9NYR8 311 aa16.1■□□□□ 0.17
PDLIM2-205ENST00000397761 CLN8Q9UBY8 286 aa16.1■□□□□ 0.17
PDLIM2-205ENST00000397761 ZNF69Q9UC07 566 aa16.1■□□□□ 0.17
PDLIM2-205ENST00000397761 TRBV23-1A0A0A0MS06 115 aa16.09■□□□□ 0.17
PDLIM2-205ENST00000397761 IGKV1D-13A0A0B4J2D9 117 aa16.09■□□□□ 0.17
PDLIM2-205ENST00000397761 FAM172BPA6NC97 362 aa16.09■□□□□ 0.17
PDLIM2-205ENST00000397761 HMX3A6NHT5 357 aa16.09■□□□□ 0.17
PDLIM2-205ENST00000397761 IGKV1-13P0DP09 117 aa16.09■□□□□ 0.17
PDLIM2-205ENST00000397761 LOXL3P58215 753 aa16.09■□□□□ 0.17
PDLIM2-205ENST00000397761 TMEM30BQ3MIR4 351 aa16.09■□□□□ 0.17
PDLIM2-205ENST00000397761 TMEM128Q5BJH2 165 aa16.09■□□□□ 0.17
PDLIM2-205ENST00000397761 LPCAT3Q6P1A2 487 aa16.09■□□□□ 0.17
PDLIM2-205ENST00000397761 NLRC3Q7RTR2 1065 aa16.09■□□□□ 0.17
PDLIM2-205ENST00000397761 SEC22CQ9BRL7 303 aa16.09■□□□□ 0.17
PDLIM2-205ENST00000397761 PATZ1Q9HBE1 687 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-205ENST00000397761 APCP25054 2843 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 HSPA12AO43301 675 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 PGAM2P15259 253 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 CEACAM6P40199 344 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 FXYD4P59646 89 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 RRAS2P62070 204 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 CARTPTQ16568 116 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 TMEM200BQ69YZ2 307 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 ZNF525Q8N782 197 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 OR8B3Q8NGG8 313 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 OR52L2PQ8NGH6 319 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 RFESDQ8TAC1 157 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 FAM216AQ8WUB2 273 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 TOMM40LQ969M1 308 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 OR8B2Q96RD0 313 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 BARX1Q9HBU1 254 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 JPT1Q9UK76 154 aa16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 C14orf166Q9Y224 244 aaKnown RBP16.08■□□□□ 0.16
PDLIM2-205ENST00000397761 MEX3AA1L020 520 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 PI3P19957 117 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 GNRHRP30968 328 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 CBX3Q13185 183 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 DHRS2Q13268 280 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 PPP1R1AQ13522 171 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 ZNF273Q14593 569 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 GNMTQ14749 295 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 C11orf91Q3C1V1 193 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 LY6G6FQ5SQ64 297 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 HIST2H2BCQ6DN03 193 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 OR10A7Q8NGE5 316 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 C8orf46Q8TAG6 207 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 ZNF431Q8TF32 576 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 NEURL2Q9BR09 285 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 PARP12Q9H0J9 701 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 OR2S2Q9NQN1 319 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 ARHGAP32A7KAX9 2087 aa16.07■□□□□ 0.16
PDLIM2-205ENST00000397761 CREBL2O60519 120 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 DLX6P56179 175 aa16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 SUPT4H1P63272 117 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 C4orf46Q504U0 113 aa16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 CD276Q5ZPR3 534 aa16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 WDR25Q64LD2 544 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 ZNF787Q6DD87 383 aa16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 LYG2Q86SG7 212 aa16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 OR52B4Q8NGK2 314 aa16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 OR52M1Q8NGK5 317 aa16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 GSX2Q9BZM3 304 aa16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 GAL3ST2Q9H3Q3 398 aa16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 SLC2A9Q9NRM0 540 aa16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 POLQO75417 2590 aa16.06■□□□□ 0.16
PDLIM2-205ENST00000397761 C9orf170A2RU37 121 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 ITGB1BP1O14713 200 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 YPEL1O60688 119 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 AKR1C4P17516 323 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 PDLIM4P50479 330 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 LUMP51884 338 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 RND3P61587 244 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 FAM185AQ8N0U4 392 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 OR10V1Q8NGI7 309 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 H1FXQ92522 213 aaKnown RBP16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 NRGNQ92686 78 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 NINJ1Q92982 152 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 YPEL2Q96QA6 119 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 SLC5A7Q9GZV3 580 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 ITPR2Q14571 2701 aa16.05■□□□□ 0.16
PDLIM2-205ENST00000397761 CRYM-AS1A6NIL9 109 aa16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 NDUFS8O00217 210 aa16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 HLA-AP01891 365 aaKnown RBP16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 PPP1CCP36873 323 aaKnown RBP16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 ATP5J2P56134 94 aa16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 PIGPP57054 158 aa16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 MSMO1Q15800 293 aa16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 MORN2Q502X0 79 aa16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 FAM53AQ6NSI3 398 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 HEPN1Q6WQI6 88 aa16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 SECTM1Q8WVN6 248 aa16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 ZNF714Q96N38 554 aa16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 MED28Q9H204 178 aa16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 GFOD1Q9NXC2 390 aa16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 IDI2-AS1Q9NZ38 188 aa16.04■□□□□ 0.16
PDLIM2-205ENST00000397761 GPR31O00270 319 aa16.03■□□□□ 0.16
PDLIM2-205ENST00000397761 PFDN1O60925 122 aa16.03■□□□□ 0.16
PDLIM2-205ENST00000397761 DUS4LO95620 317 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms