RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 OSR2Q8N2R0 312 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 OR4A4PQ8NGN8 299 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 NEU4Q8WWR8 484 aaPredicted RBP12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 NRIP2Q9BQI9 281 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 HSF4Q9ULV5 492 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 EDARQ9UNE0 448 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 PPP1R3CQ9UQK1 317 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 SRRM5B3KS81 715 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 HOXB5P09067 269 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 PJVKQ0ZLH3 352 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 RBM39Q14498 530 aaKnown RBP12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 SMIM8Q96KF7 97 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 HES4Q9HCC6 221 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 PLEKHJ1Q9NW61 149 aa12.44□□□□□ -0.42
TM9SF1-202ENST00000396854 CRYM-AS1A6NIL9 109 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 ZNF705EA8MWA4 302 aaPredicted RBP12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 KNG1P01042 644 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 LHBP01229 141 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 HKR1P10072 659 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 GABRR1P24046 479 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 AKR1C2P52895 323 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 S100A10P60903 97 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 FGF12P61328 243 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 AKR1C1Q04828 323 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 GUCA2BQ16661 112 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 OR11L1Q8NGX0 322 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 LRRC29Q8WV35 223 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 ZNF488Q96MN9 340 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 ZNF2Q9BSG1 426 aaPredicted RBP12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 ANXA10Q9UJ72 324 aa12.43□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A10PA6NDY2 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A18PA6NE21 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A16PA6NEW6 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A20PA6NIJ5 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A8PA6NJQ4 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A7PA6NKC0 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A22PA8MWA6 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A12PA8MX19 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A5PA8MXJ8 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A23PA8MXZ1 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 IFNL4K9M1U5 179 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A15PP0C7V4 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A13PP0C7W8 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A14PP0C7W9 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM90A24PP0C7X0 464 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 CDKN1AP38936 164 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 RBM11P57052 281 aaKnown RBP12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FLI1Q01543 452 aaPredicted RBP12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 EIF5AL1Q6IS14 154 aaKnown RBP12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 LDLRAD3Q86YD5 345 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 SGPP2Q8IWX5 399 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 GCSAMQ8N6F7 178 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 CCL19Q99731 98 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 GSKIPQ9P0R6 139 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 RNF7Q9UBF6 113 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 IGHV1-69-2A0A0G2JMI3 117 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 F8W036 122 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 DTYMKP23919 212 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 CHATP28329 748 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 BLOC1S1P78537 153 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 MRPS11P82912 194 aaKnown RBP12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 SRSF3P84103 164 aaKnown RBP12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 IAH1Q2TAA2 248 aaPredicted RBP12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 FAM58AQ8N1B3 248 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 HDHD3Q9BSH5 251 aaPredicted RBP12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 SEC11CQ9BY50 192 aa12.42□□□□□ -0.42
TM9SF1-202ENST00000396854 EGR1P18146 543 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 PIGYQ3MUY2 71 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 ZNF787Q6DD87 383 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 BATF2Q8N1L9 274 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 TAF9BQ9HBM6 251 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 OR2S2Q9NQN1 319 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 TMEM106BQ9NUM4 274 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 FASNP49327 2511 aaKnown RBP12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 FBN2P35556 2912 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 LRRC30A6NM36 301 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 NDUFA2O43678 99 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 DEDDO75618 318 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 NXPH2O95156 264 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 IRF2P14316 349 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 TAF9Q16594 264 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 TMEM268Q5VZI3 342 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 RPL7L1Q6DKI1 246 aaKnown RBP12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 DHRS7BQ6IAN0 325 aaPredicted RBP12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 ACP7Q6ZNF0 438 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 TGIF2LYQ8IUE0 185 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 UQCC1Q9NVA1 299 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 AK3Q9UIJ7 227 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 ST3GAL6Q9Y274 331 aa12.41□□□□□ -0.42
TM9SF1-202ENST00000396854 CELSR2Q9HCU4 2923 aa12.4□□□□□ -0.42
TM9SF1-202ENST00000396854 GEMIN2O14893 280 aaKnown RBP12.4□□□□□ -0.42
TM9SF1-202ENST00000396854 SNAPINO95295 136 aa12.4□□□□□ -0.42
TM9SF1-202ENST00000396854 CYB5R3P00387 301 aaPredicted RBP12.4□□□□□ -0.42
TM9SF1-202ENST00000396854 GAPDHP04406 335 aaKnown RBP12.4□□□□□ -0.42
TM9SF1-202ENST00000396854 OR5H8P0DN80 308 aa12.4□□□□□ -0.42
TM9SF1-202ENST00000396854 PRKACAP17612 351 aa12.4□□□□□ -0.42
TM9SF1-202ENST00000396854 SULT1A2P50226 295 aa12.4□□□□□ -0.42
TM9SF1-202ENST00000396854 CAV2P51636 162 aa12.4□□□□□ -0.42
TM9SF1-202ENST00000396854 IL13RA2Q14627 380 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms