RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 OR52I2Q8NH67 350 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 C8orf46Q8TAG6 207 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 GPX8Q8TED1 209 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 CMSS1Q9BQ75 279 aaKnown RBP8.4□□□□□ -1.06
NEDD8-202ENST00000396828 SULT4A1Q9BR01 284 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 DNTTIP1Q9H147 329 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 DPAGT1Q9H3H5 408 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 RIMS4Q9H426 269 aaPredicted RBP8.4□□□□□ -1.06
NEDD8-202ENST00000396828 CHMP1AQ9HD42 196 aaPredicted RBP8.4□□□□□ -1.06
NEDD8-202ENST00000396828 C12orf4Q9NQ89 552 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 ETAA1Q9NY74 926 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 MTFP1Q9UDX5 166 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 AK3Q9UIJ7 227 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 KCNK7Q9Y2U2 307 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 MAB21L2Q9Y586 359 aa8.4□□□□□ -1.06
NEDD8-202ENST00000396828 TET2Q6N021 2002 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-202ENST00000396828 IGKV1D-17A0A075B6S4 117 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 MEIS3P1A6NDR6 274 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 CENPXA8MT69 81 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 ORC5O43913 435 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 RCVRNP35243 200 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 GDNFP39905 211 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 CEBPDP49716 269 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-202ENST00000396828 GUCA2AQ02747 115 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 LY6EQ16553 131 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 LRRC10Q5BKY1 277 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 CD177Q8N6Q3 437 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 C11orf44Q8N8P7 122 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 ZNRF1Q8ND25 227 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 OR5D13Q8NGL4 314 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 NUDCD2Q8WVJ2 157 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 MED30Q96HR3 178 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 CHST6Q9GZX3 395 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 PPA2Q9H2U2 334 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 ZNF581Q9P0T4 197 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 SLC25A10Q9UBX3 287 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-202ENST00000396828 KLK11Q9UBX7 282 aa8.39□□□□□ -1.07
NEDD8-202ENST00000396828 ZNF107Q9UII5 783 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-202ENST00000396828 ELF5Q9UKW6 265 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-202ENST00000396828 RBMX2Q9Y388 322 aaKnown RBP8.39□□□□□ -1.07
NEDD8-202ENST00000396828 A0A1W2PQ09 198 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 FUOMA2VDF0 154 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 G3V4G9 280 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 SSX5O60225 188 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 PRB2P02812 416 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-202ENST00000396828 NDUFB7P17568 137 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 DTYMKP23919 212 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 FAUP35544 74 aaKnown RBP8.38□□□□□ -1.07
NEDD8-202ENST00000396828 TAS2R19P59542 299 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 GRK1Q15835 563 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 STEAP3Q658P3 488 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 C1orf122Q6ZSJ8 110 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 RTN4RL2Q86UN3 420 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 SETD6Q8TBK2 473 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 DEDD2Q8WXF8 326 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 TRIM63Q969Q1 353 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 SDSLQ96GA7 329 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 SNX22Q96L94 193 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 OCSTAMPQ9BR26 566 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 ST6GALNAC5Q9BVH7 336 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 FAM234AQ9H0X4 552 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 ZNF222Q9UK12 451 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 COL7A1Q02388 2944 aa8.38□□□□□ -1.07
NEDD8-202ENST00000396828 NBEAL2Q6ZNJ1 2754 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 LINC00854A0A1B0GVQ3 168 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 ANKRD20A5PA0PJZ0 165 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 TMEM30CPA0ZSE6 113 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 H3BUX3 64 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 SIGLEC5O15389 551 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 PLXNB1O43157 2135 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 LANCL1O43813 399 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 PSPNO60542 156 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 TK1P04183 234 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 CSN2P05814 226 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 FCGR3AP08637 254 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 TBPP20226 339 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 OR3A1P47881 315 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 UBE2E1P51965 193 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 ATXN7L3Q14CW9 347 aaPredicted RBP8.37□□□□□ -1.07
NEDD8-202ENST00000396828 MZT2BQ6NZ67 158 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 GDPD3Q7L5L3 318 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 LYSMD2Q8IV50 215 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 C11orf42Q8N5U0 333 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 TMEM229BQ8NBD8 167 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 BEND2Q8NDZ0 799 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 TMEM185AQ8NFB2 350 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 OR4S1Q8NGB4 309 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 PIFOQ8TCI5 191 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 DMRTB1Q96MA1 342 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 SSX3Q99909 188 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 C7orf50Q9BRJ6 194 aaKnown RBP8.37□□□□□ -1.07
NEDD8-202ENST00000396828 C19orf12Q9NSK7 152 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 MGAT4AQ9UM21 535 aa8.37□□□□□ -1.07
NEDD8-202ENST00000396828 DNAH9Q9NYC9 4486 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 TMEM82A0PJX8 343 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 NAP1L6A6NFF2 107 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 ZNF736B4DX44 427 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-202ENST00000396828 K7N7A8 449 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 M0R1W7 72 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 MGST3O14880 152 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms