RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TMEM11P17152 192 aa16.17■□□□□ 0.18
HOXC6-202ENST00000394331 GCH1P30793 250 aa16.17■□□□□ 0.18
HOXC6-202ENST00000394331 CTRLP40313 264 aa16.17■□□□□ 0.18
HOXC6-202ENST00000394331 RPS20P60866 119 aaKnown RBP16.17■□□□□ 0.18
HOXC6-202ENST00000394331 MRPS34P82930 218 aaKnown RBP16.17■□□□□ 0.18
HOXC6-202ENST00000394331 NMSQ5H8A3 153 aa16.17■□□□□ 0.18
HOXC6-202ENST00000394331 CXorf66Q5JRM2 361 aaPredicted RBP16.17■□□□□ 0.18
HOXC6-202ENST00000394331 STPG4Q8N801 248 aa16.17■□□□□ 0.18
HOXC6-202ENST00000394331 OR11L1Q8NGX0 322 aa16.17■□□□□ 0.18
HOXC6-202ENST00000394331 FAM71F1Q96KD3 344 aaPredicted RBP16.17■□□□□ 0.18
HOXC6-202ENST00000394331 TRAF3IP2O43734 574 aaPredicted RBP16.16■□□□□ 0.18
HOXC6-202ENST00000394331 FKBP2P26885 142 aaKnown RBP16.16■□□□□ 0.18
HOXC6-202ENST00000394331 SLC25A47Q6Q0C1 308 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 SELENOHQ8IZQ5 122 aaKnown RBP16.16■□□□□ 0.18
HOXC6-202ENST00000394331 LYG1Q8N1E2 194 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 SUMF1Q8NBK3 374 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 OR2M3Q8NG83 312 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 PLPPR1Q8TBJ4 325 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 OXGR1Q96P68 337 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 ZNF286AQ9HBT8 521 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 UQCR10Q9UDW1 63 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 LOC105371242A0A075B767 164 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 F6UZH7 168 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 IGLV3-1P01715 115 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 COMPP49747 757 aaPredicted RBP16.16■□□□□ 0.18
HOXC6-202ENST00000394331 PAX9P55771 341 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 YPEL3P61236 119 aaPredicted RBP16.16■□□□□ 0.18
HOXC6-202ENST00000394331 ZNF695Q8IW36 515 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 PARLQ9H300 379 aa16.16■□□□□ 0.18
HOXC6-202ENST00000394331 JMJD7P0C870 316 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 FOXL1Q12952 345 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 RNPS1Q15287 305 aaKnown RBP16.15■□□□□ 0.18
HOXC6-202ENST00000394331 GUSBP11Q6P575 273 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 FAM57BQ71RH2 274 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 SCGB1C1Q8TD33 95 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 ZNF552Q9H707 407 aaPredicted RBP16.15■□□□□ 0.18
HOXC6-202ENST00000394331 CXCL12P48061 93 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 UBE2G2P60604 165 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 CST9LP1Q5W188 147 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 SPACA9Q96E40 222 aaPredicted RBP16.15■□□□□ 0.18
HOXC6-202ENST00000394331 DEFB126Q9BYW3 111 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 ADAMTS20P59510 1910 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 MPLP40238 635 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 FGF8P55075 233 aaPredicted RBP16.15■□□□□ 0.18
HOXC6-202ENST00000394331 RTP5Q14D33 572 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 OR8B8Q15620 311 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 SLC25A24Q6NUK1 477 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 PP6455Q8WZ26 134 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 CORO2AQ92828 525 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 COX11Q9Y6N1 276 aa16.15■□□□□ 0.18
HOXC6-202ENST00000394331 CHD3Q12873 2000 aaKnown RBP16.14■□□□□ 0.17
HOXC6-202ENST00000394331 IGHV2-70DA0A0C4DH43 119 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 A0A1W2PNR3 127 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 A0A1W2PQM1 296 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 HS3ST1O14792 307 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 ADAM20O43506 726 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 GYPAP02724 150 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 OPN1LWP04000 364 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 CYC1P08574 325 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 GLI4P10075 376 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 VDAC1P21796 283 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 HERV-K104P61576 105 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 CCL7P80098 99 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 MMDQ15546 238 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 ZNF738Q8NE65 137 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 NUDT10Q8NFP7 164 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 HSPB7Q9UBY9 170 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 LAMTOR2Q9Y2Q5 125 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 EXPH5Q8NEV8 1989 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 IGHV5-10-1A0A0J9YXX1 117 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 CHST1O43916 411 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 CIDEAO60543 219 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 PPP1CBP62140 327 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 MFAP5Q13361 173 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 Q6ZSR3 168 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 CABIN1Q9Y6J0 2220 aa16.14■□□□□ 0.17
HOXC6-202ENST00000394331 LOC102725191A0A1B0GVB3 256 aa16.13■□□□□ 0.17
HOXC6-202ENST00000394331 TLX3O43711 291 aaPredicted RBP16.13■□□□□ 0.17
HOXC6-202ENST00000394331 PDGFBP01127 241 aaPredicted RBP16.13■□□□□ 0.17
HOXC6-202ENST00000394331 CDAP32320 146 aa16.13■□□□□ 0.17
HOXC6-202ENST00000394331 CARD17Q5XLA6 110 aa16.13■□□□□ 0.17
HOXC6-202ENST00000394331 OR1L6Q8NGR2 347 aa16.13■□□□□ 0.17
HOXC6-202ENST00000394331 MRPL30Q8TCC3 161 aaKnown RBP16.13■□□□□ 0.17
HOXC6-202ENST00000394331 RNF2Q99496 336 aa16.13■□□□□ 0.17
HOXC6-202ENST00000394331 VSIRQ9H7M9 311 aa16.13■□□□□ 0.17
HOXC6-202ENST00000394331 ADAMTS9Q9P2N4 1935 aa16.13■□□□□ 0.17
HOXC6-202ENST00000394331 MLNRO43193 412 aa16.13■□□□□ 0.17
HOXC6-202ENST00000394331 PSMB3P49720 205 aa16.13■□□□□ 0.17
HOXC6-202ENST00000394331 RPUSD4Q96CM3 377 aaKnown RBP16.13■□□□□ 0.17
HOXC6-202ENST00000394331 C10orf35Q96D05 121 aa16.13■□□□□ 0.17
HOXC6-202ENST00000394331 UBE2J1Q9Y385 318 aaPredicted RBP16.13■□□□□ 0.17
HOXC6-202ENST00000394331 ARID1BQ8NFD5 2236 aaPredicted RBP16.13■□□□□ 0.17
HOXC6-202ENST00000394331 CEP192Q8TEP8 1941 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 K7ESF4 209 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 RRADP55042 308 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 HIST3H3Q16695 136 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 OR5AU1Q8NGC0 362 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 CLDN23Q96B33 292 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 RSG1Q9BU20 258 aa16.12■□□□□ 0.17
HOXC6-202ENST00000394331 AQP7P3A6NL99 342 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms