RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ZMIZ1Q9ULJ6 1067 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 AMY1AP04745 511 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 SEC11BP0C7V7 166 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 CDAP32320 146 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 OR6X1Q8NH79 312 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 VN1R1Q9GZP7 353 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 ALPK2Q86TB3 2170 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 FAM106CPP0CH98 169 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 GFERP55789 205 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 PPP1R1AQ13522 171 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 S100A7L2Q5SY68 101 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 ZNF646O15015 1829 aaPredicted RBP12.99□□□□□ -0.33
CCDC50-201ENST00000392455 RAB29O14966 203 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 ZNF688P0C7X2 276 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 SUMO2P61956 95 aaKnown RBP12.99□□□□□ -0.33
CCDC50-201ENST00000392455 OR52M1Q8NGK5 317 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 TMEM272A0A1B0GTI8 110 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.99□□□□□ -0.33
CCDC50-201ENST00000392455 HARBI1Q96MB7 349 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 KLK11Q9UBX7 282 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 TRAV39A0A0B4J263 110 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 TMPRSS2O15393 492 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 LINC01565O15544 149 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 CTAG2O75638 210 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 ATP5LO75964 103 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 LHX8Q68G74 356 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 ISG20L2Q9H9L3 353 aaKnown RBP12.99□□□□□ -0.33
CCDC50-201ENST00000392455 LRRC75AQ8NAA5 344 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 TMEM190Q8WZ59 177 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 CCL17Q92583 94 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 TMEM45BQ96B21 275 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 C4orf45Q96LM5 186 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 PRNTQ86SH4 94 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 RARRES2Q99969 163 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 GPR35Q9HC97 309 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 MSL2Q9HCI7 577 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 NPVFQ9HCQ7 196 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 DOCK5Q9H7D0 1870 aa12.99□□□□□ -0.33
CCDC50-201ENST00000392455 C2CD4DB7Z1M9 353 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 SPRY1O43609 319 aaPredicted RBP12.98□□□□□ -0.33
CCDC50-201ENST00000392455 CYB5R3P00387 301 aaPredicted RBP12.98□□□□□ -0.33
CCDC50-201ENST00000392455 FTH1P19P0C7X4 201 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 FAM222BQ8WU58 562 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 NPFFO15130 113 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 MOSPD3O75425 235 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 DMRTC1Q5HYR2 192 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 SGMS2Q8NHU3 365 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 LSM6P62312 80 aaKnown RBP12.98□□□□□ -0.33
CCDC50-201ENST00000392455 PQLC2Q6ZP29 291 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 MYLKQ15746 1914 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 LOC389332A0A1B0GUA5 103 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 SYNGR1O43759 233 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 ABHD1Q96SE0 405 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 PDFQ9HBH1 243 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 HSPB7Q9UBY9 170 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 SRD5A2P31213 254 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 FGF8P55075 233 aaPredicted RBP12.98□□□□□ -0.33
CCDC50-201ENST00000392455 RPS4XP62701 263 aaKnown RBP12.98□□□□□ -0.33
CCDC50-201ENST00000392455 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
CCDC50-201ENST00000392455 GPBAR1Q8TDU6 330 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 FZR1Q9UM11 496 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 KLK10O43240 276 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 FCGR3AP08637 254 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 CNTFRP26992 372 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 RPS27P42677 84 aaKnown RBP12.98□□□□□ -0.33
CCDC50-201ENST00000392455 MAMSTRQ6ZN01 415 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 OR11G2Q8NGC1 345 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 OR10D3Q8NH80 312 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 ALS2Q96Q42 1657 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 A0A1B0GW15 77 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 OR11H12B2RN74 326 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 ZNF506Q5JVG8 444 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 CXorf67Q86X51 503 aaPredicted RBP12.98□□□□□ -0.33
CCDC50-201ENST00000392455 OR11H1Q8NG94 326 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 OR11H2Q8NH07 326 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 MAFAQ8NHW3 353 aaPredicted RBP12.98□□□□□ -0.33
CCDC50-201ENST00000392455 RBKSQ9H477 322 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 ZDHHC8Q9ULC8 765 aa12.98□□□□□ -0.33
CCDC50-201ENST00000392455 H3BQ15 152 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 IGHV4-34P06331 123 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 PCBP3P57721 371 aaKnown RBP12.97□□□□□ -0.33
CCDC50-201ENST00000392455 OVOL2Q9BRP0 275 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 SSPNQ14714 243 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 TCTN3Q6NUS6 607 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 ANKRD37Q7Z713 158 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 PTP4A1Q93096 173 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 WNT5BQ9H1J7 359 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 LINC01549A6NIU2 74 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 MRPL54Q6P161 138 aaKnown RBP12.97□□□□□ -0.33
CCDC50-201ENST00000392455 AHDC1Q5TGY3 1603 aaPredicted RBP12.97□□□□□ -0.33
CCDC50-201ENST00000392455 AVPR2P30518 371 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 NAAAQ02083 359 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 ALKBH3Q96Q83 286 aaPredicted RBP12.97□□□□□ -0.33
CCDC50-201ENST00000392455 ZNF83P51522 516 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 ACVR1Q04771 509 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 OR13C6PQ8NH95 151 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 LRRC29Q8WV35 223 aa12.97□□□□□ -0.33
CCDC50-201ENST00000392455 MBD1Q9UIS9 605 aaPredicted RBP12.97□□□□□ -0.33
CCDC50-201ENST00000392455 UPK1AO00322 258 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms