RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 IL2RGP31785 369 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 CEACAM6P40199 344 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 MST1LQ2TV78 715 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 CR1LQ2VPA4 569 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 LRRC37A5PQ49AS3 106 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 C4orf17Q53FE4 359 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 FAM122CQ6P4D5 195 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 ZNF546Q86UE3 836 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 OR5D13Q8NGL4 314 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 OR13A1Q8NGR1 328 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 THAP6Q8TBB0 222 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 TMEM222Q9H0R3 208 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 ODAMA1E959 279 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 LOXP28300 417 aaPredicted RBP9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 S100A11P31949 105 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 OPCMLQ14982 345 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 GGNBP1Q5YKI7 109 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 ZNF767PQ75MW2 155 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 ZCCHC24Q8N2G6 241 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 ZNF808Q8N4W9 903 aaPredicted RBP9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 TPRX1Q8N7U7 411 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 GALNT11Q8NCW6 608 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 ZNRF1Q8ND25 227 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 UBALD1Q8TB05 177 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 AKR1E2Q96JD6 320 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 TMEM204Q9BSN7 226 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 MFFQ9GZY8 342 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 DYNLRB1Q9NP97 96 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 CISD1Q9NZ45 108 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 TNFSF18Q9UNG2 199 aa9.55□□□□□ -0.88
SMARCAL1-203ENST00000392128 DEFB108AA8MXU0 73 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 PGLYRP1O75594 196 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 PLAUP00749 431 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 P2RX3P56373 397 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 EDDM3AQ14507 147 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 ZNF345Q14585 488 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 TMUB2Q71RG4 321 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 C1orf87Q8N0U7 546 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 SVIPQ8NHG7 77 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 TMEM56Q96MV1 263 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 RBM14Q96PK6 669 aaKnown RBP9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 FAM234AQ9H0X4 552 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 ZNF665Q9H7R5 613 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 TMEM56-RWDD3S4R434 201 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 NBASA2RRP1 2371 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 DSCAML1Q8TD84 2053 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 ARFGEF3Q5TH69 2177 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 H0Y980 276 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 C15orf65H3BRN8 121 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 IGLV2-14P01704 120 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 GZMHP20718 246 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 SSTR5P35346 364 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 HTD2P86397 168 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 IAH1Q2TAA2 248 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 ZNF672Q499Z4 452 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 TEX261Q6UWH6 196 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 ZNF788Q6ZQV5 615 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 TGIF2LYQ8IUE0 185 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 LHFPL5Q8TAF8 219 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 GAFA1Q96PS6 74 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 MBD2Q9UBB5 411 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 TMED3Q9Y3Q3 217 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 U3KQ87 197 aa9.54□□□□□ -0.88
SMARCAL1-203ENST00000392128 ANKHD1Q8IWZ3 2542 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 A0A0D9SG52 128 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 SPINT2O43291 252 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 LYL1P12980 280 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 AGAP20933 346 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 UCP1P25874 307 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 SWI5Q1ZZU3 235 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 LYZL2Q7Z4W2 148 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 OR8H1Q8NGG4 311 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 NINJ1Q92982 152 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 ARL11Q969Q4 196 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 PARP12Q9H0J9 701 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 UBE2J1Q9Y385 318 aaPredicted RBP9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 TPRP12270 2363 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 ROS1P08922 2347 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 TRAV38-1A0A0B4J264 116 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 DUXBA0A1W2PPF3 345 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 TMEM178BH3BS89 294 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 LGALS8O00214 317 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 OR2F2O95006 317 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 CDS2O95674 445 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 PET100P0DJ07 73 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 F2RP25116 425 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 OR2F1Q13607 317 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 PRSS54Q6PEW0 395 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 OR52L2PQ8NGH6 319 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 IL22RA2Q969J5 263 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 C14orf79Q96F83 325 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 RNF126Q9BV68 326 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 ARL6Q9H0F7 186 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 TMEM106BQ9NUM4 274 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 OR6C3Q9NZP0 311 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 RBM7Q9Y580 266 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 HIVEP3Q5T1R4 2406 aa9.53□□□□□ -0.88
SMARCAL1-203ENST00000392128 PIGBOS1A0A0B4J2F0 54 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 SIGLEC5O15389 551 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 TNFSF12O43508 249 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms