RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ASB13Q8WXK3 278 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 FGF14Q92915 247 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 TCEAL3Q969E4 200 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 PPCDCQ96CD2 204 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 DDIT4LQ96D03 193 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 RCN3Q96D15 328 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 ZMYND19Q96E35 227 aaPredicted RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SEH1LQ96EE3 360 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 C14orf144Q96I85 54 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 TBX5Q99593 518 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 GINS3Q9BRX5 216 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 TAPBPLQ9BX59 468 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 YIPF3Q9GZM5 350 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 CHST5Q9GZS9 411 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 DCSTAMPQ9H295 470 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 OR51I1Q9H343 314 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 RPF2Q9H7B2 306 aaKnown RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF442Q9H7R0 627 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 REEP1Q9H902 201 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 TAS2R13Q9NYV9 303 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 ZNRD1Q9P1U0 126 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 OPTCQ9UBM4 332 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SS18L2Q9UHA2 77 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 CES1P1Q9UKY3 287 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 ING4Q9UNL4 249 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SNX10Q9Y5X0 201 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 S4R3C0 116 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 SYNMO15061 1565 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 NLRC5Q86WI3 1866 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 RIMS1Q86UR5 1692 aaKnown RBP1.32□□□□□ -2.2
TRAV40-201ENST00000390467 A0A1W2PP64 1363 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 UHRF1BP1Q6BDS2 1440 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 ERBINQ96RT1 1412 aa1.32□□□□□ -2.2
TRAV40-201ENST00000390467 YLPM1P49750 1951 aaKnown RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 IGHV2OR16-5A0A0B4J2B6 119 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 FAM240AA0A1B0GVK7 77 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 EXOC1LA0A1B0GW35 172 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 DAPL1A0PJW8 107 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 A6NDN8 102 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 NCBP2LA6PVI3 153 aaKnown RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 BTNL10A8MVZ5 291 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 FAM25AB3EWG3 89 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 FAM25CB3EWG5 89 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 FAM25GB3EWG6 89 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 TNFRSF11BO00300 401 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 CYB5BO43169 146 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 MFSD11O43934 449 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 CCDC22O60826 627 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 FKBP6O75344 327 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 GCM2O75603 506 aaPredicted RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 STK16O75716 305 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 SOX14O95416 240 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 PTTG1O95997 202 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 HPRT1P00492 218 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 ARG1P05089 322 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 S100A8P05109 93 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 OR13C7P0DN81 318 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 CD37P11049 281 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 IFI30P13284 250 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 GABRA1P14867 456 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF250P15622 560 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 MYL12AP19105 171 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 USF1P22415 310 aaPredicted RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 AK4P27144 223 aaPredicted RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 ARL2P36404 184 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 CD200P41217 278 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 OR1E2P47887 323 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 REG1BP48304 166 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 GCLMP48507 274 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 SERPINB10P48595 397 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 GZMMP51124 257 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 RAB38P57729 211 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 TAS2R43P59537 309 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 RPS20P60866 119 aaKnown RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 CKS1BP61024 79 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 TBPL1P62380 186 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 RHOBP62745 196 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 HIST1H3AP68431 136 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 ARG2P78540 354 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 H3F3AP84243 136 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 CDK5Q00535 292 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 IFITM2Q01629 132 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 SLC25A11Q02978 314 aaKnown RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 BAMBIQ13145 260 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 CLINT1Q14677 625 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 SNRNP35Q16560 246 aaKnown RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 CLEC12BQ2HXU8 276 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 PLPPR5Q32ZL2 321 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 ACSBG2Q5FVE4 666 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 TPTE2P1Q5T6R2 138 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM78Q5T7P6 136 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 HENMT1Q5T8I9 393 aaKnown RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 TNFAIP8L2Q6P589 184 aaPredicted RBP1.31□□□□□ -2.2
TRAV40-201ENST00000390467 XKRXQ6PP77 449 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 OPN5Q6U736 354 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 TOMM20LQ6UXN7 152 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 RASSF6Q6ZTQ3 369 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 HIST2H3AQ71DI3 136 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 SLC16A13Q7RTY0 426 aa1.31□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM150AQ86TG1 271 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms